Gene Information

Name : Hhal_1042 (Hhal_1042)
Accession : YP_001002620.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1125586 - 1127592 bp
Length : 2007 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: aeh:Mlg_2841 transketolase

DNA sequence :
ATGGCGTCGACCGAACTGAGCCGACGAGAGCTCGCCAACGGCATTCGCGCCCTGGCCATGGACGCTGTCCAGAAGGCCAA
TTCCGGCCATCCCGGGGCGCCGATGGGCATGGCGGATATCGCCGAGGTGCTGTGGCGGGACTACCTGCGCCATGCGCCGC
AGAGGCCGGGCTGGTTCGACCGCGACCGCTTTGTCCTCTCCAATGGCCACGGTTCGATGTTGCAGTACGCACTGCTCCAT
CTGAGCGGTTACGACGTCTCCGTCGACGACCTCAAGAACTTCCGGCAGCTGCACTCGCGCACGCCGGGCCACCCGGAGTA
CGGCTACACCCCCGGCGTCGAGACCACCACCGGGCCGCTGGGCCAGGGGTTGGCCAACAGCGTCGGCATGGCGCTGGCCG
AGCGGATGCTGGCGGCGCGCTTCAACCGCCCTGGTCACGAGATCATCGACCACTACACCTACGTCTTCATGGGCGACGGC
TGCCTGATGGAGGGGGTCTCCCACGAGGCCTGCTCGCTGGCCGGCACTCTCGGCCTGGGCAAGCTGATCGCCTTCTATGA
CGACAACAGCATCTCCATCGACGGCAACGTCGAGGGCTGGTACACCGAGGACGTCCGTCAGCGCTTCGAGGCCTACGGCT
GGCAGGTGATCGGTCCCATCGACGGCCACGACGGCGAGGCCGTGCGCCAGGCCATTGAGCAGGCGCGCGCCGACACCAGC
CGTCCCACGCTGATCGACTGCAAGACGGTGATCGGCTTCGGTGCGCCGAATCAGTGCGGTACCGCCGGCGTGCACGGTGC
GCCGCTGGGCGAGGAGGAGATCGCGGCCTGTCGCAAGGAGCTCGGCTGGGAGCACGGTCCGTTCGAGATCCCCGACGCGC
ACTACCAGGCGTGGGATGGTCGCGGCCGGGGCGAGGAACTCCTGCAGGCCTGGGGCGAGCGCCTTGAGGCGTACCGCAAG
GAACACCCCGAGCTGGCCGATGAGCTGGAGCGGCGGATGCGCGGCGAGCTGCCGGGCAACTGGCAGGAGCTGGTCGCCGA
GGGCCTGGAGAAGTTCGCCGGCGGCAAGAAGGACGCCACTCGCAAGAGCTCCCAGGCGGTGCTCGGCCACTTCGGCCCGC
ACTTGCCCGAGCTGCTGGGTGGCTCTGCCGACCTGACCGGCTCCAACAACACCTGGTGGGACGGCTGCTCGACGGTCAGC
CAAGCGCAGGCCGACGGCAACTACGTCTTCTACGGTGTCCGCGAGTTCGGGATGACGGCGATCATGAACGGCGTCGCCCT
GCACGGCGGGTTCATCCCCTACGGCGGCACCTTCCTGATCTTCTCCGACTACGCGCGCAACGCTGTGCGCATGGCCGCGC
TGATGAAGCAGCGGGTGGTGATGGTCTACACCCACGACTCCATCGGCCTGGGCGAGGACGGCCCCACCCACCAGCCGATC
GAACAGCTGGCCAGCCTGCGCCTGATCCCCAACCTGCACGTCTGGCGCCCGTGCGACGCCCAGGAGACGGCTGCGGCCTG
GGCGGCGTCCATCGCCCGCGAGGACGGCCCGAGCATGCTGGCGCTGTCGCGCCAGGGCATGGAGCCGCAGCAGCGCAACG
GCGAGCAAGTCCGGTCCATCTCCCGTGGTGGCTACATCCTCAAGGAGGCCGGTTCCGGCAAGCCCGAACTGGTGATCCTG
GCCACGGGCTCCGAGGTGGATCTGGCCATGGCGGCCCGCGAGCAGCTCGAGGCCGAGGGGCGCGCGGTGCGCGTGGTCTC
CATGCCGTGTGTCGAGGCGTTCTGTGAGCAGGACGAGGCCTACCGGCAGCAGGTCCTGCCCGGTGACGTGCCGCGGGTGG
CCGTCGAGGCCGGCGCCACCGGCCTGTGGCAGGGCTGGGTCGGCCAGTGTGGCCTGGTGGTTGGCATCGACACCTTCGGC
GAATCGGCGCCGGGGCCCGAGCTCTACGAGCACTTCGGCCTGACCGCGGACAACGTCGCCACTGCGGGTCGGCGCGTCCT
CGGCTGA

Protein sequence :
MASTELSRRELANGIRALAMDAVQKANSGHPGAPMGMADIAEVLWRDYLRHAPQRPGWFDRDRFVLSNGHGSMLQYALLH
LSGYDVSVDDLKNFRQLHSRTPGHPEYGYTPGVETTTGPLGQGLANSVGMALAERMLAARFNRPGHEIIDHYTYVFMGDG
CLMEGVSHEACSLAGTLGLGKLIAFYDDNSISIDGNVEGWYTEDVRQRFEAYGWQVIGPIDGHDGEAVRQAIEQARADTS
RPTLIDCKTVIGFGAPNQCGTAGVHGAPLGEEEIAACRKELGWEHGPFEIPDAHYQAWDGRGRGEELLQAWGERLEAYRK
EHPELADELERRMRGELPGNWQELVAEGLEKFAGGKKDATRKSSQAVLGHFGPHLPELLGGSADLTGSNNTWWDGCSTVS
QAQADGNYVFYGVREFGMTAIMNGVALHGGFIPYGGTFLIFSDYARNAVRMAALMKQRVVMVYTHDSIGLGEDGPTHQPI
EQLASLRLIPNLHVWRPCDAQETAAAWAASIAREDGPSMLALSRQGMEPQQRNGEQVRSISRGGYILKEAGSGKPELVIL
ATGSEVDLAMAAREQLEAEGRAVRVVSMPCVEAFCEQDEAYRQQVLPGDVPRVAVEAGATGLWQGWVGQCGLVVGIDTFG
ESAPGPELYEHFGLTADNVATAGRRVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 64
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 59