Gene Information

Name : hemC (Hhal_1025)
Accession : YP_001002603.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1099260 - 1100192 bp
Length : 933 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGGCCGCTGAATCCCTGCGAATCGCCACCCGCCGTTCCCAGCTTGCCATGTGGCAGGCCGAGCACATTGCCGCCGAGTT
GCAGCGCCTGCACCCCGGCCTGGAGGTGGAGCTGGTCCCCATGTCCACCCGTGGGGACGAGATCCTCGACCAGCCGCTAG
CGCGCATCGGCGGCAAGGGCCTGTTTATGAAGGAGCTCGAGGACGGCATGCTGCGCGGCGAGGCCGACCTGGCCGTGCAC
TCGATGAAGGACATCCCCTGGCGCCTGCCCGAGGGCTTCGACCTGGCTGCCGTCTCGGACCGGGCCGACCCGCGGGACGC
CTTCGTCTCCAACCACTATTCCGACCTGGATGAGCTGCCCCACGGCGCCCGGGTGGGCACGGCCAGCCTGCGCCGCCAGT
GCCAGATCATGGACCGCCGCCCCGACCTGCAGATCGAGGTCCTGCGCGGCAACGTCCAGACCCGCCTGCGCAAGCTCGAT
GACGGCGTCTACGACGCGATCATCCTGGCCGCCTCCGGGCTCGACCGCCTGGAGCTGACCCACCGCATCGCCGGACGCCT
CACGCCGGAGCAGAGCCTGCCGGCGGTGGGCCAGGGCGCCCTGGGCATCGAGTGCCGCGAGGGCGATGAGCGGGTGATGA
AGCTCGTCGAGGGGCTCAATCACGAGGCCACCCGCATCCGGATCAACGCCGAGCGGGGCATGAACGCCCGACTCGAGGGC
AGCTGCCAGGTCCCCATCGGCGGCTACGCGGAGCTCGACGGCGATGAGGTCCACCTGCGGGGGCTGGTAGGCGCCATCGA
CGGCAGCGAGGTCATCCGGGGCGAGATCCGCGGCCCCGCCGCGGAGGCCGAGAACCTCGGCCGACAGCTGGGTGACGATC
TGCTCGCCCGCGGTGCCGACCGCATCCTCAAGGCCGTCGCCGAGCAGCAATGA

Protein sequence :
MAAESLRIATRRSQLAMWQAEHIAAELQRLHPGLEVELVPMSTRGDEILDQPLARIGGKGLFMKELEDGMLRGEADLAVH
SMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDELPHGARVGTASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLD
DGVYDAIILAASGLDRLELTHRIAGRLTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARLEG
SCQVPIGGYAELDGDEVHLRGLVGAIDGSEVIRGEIRGPAAEAENLGRQLGDDLLARGADRILKAVAEQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-83 59
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-83 59