Gene Information

Name : Hhal_0967 (Hhal_0967)
Accession : YP_001002545.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1038190 - 1040265 bp
Length : 2076 bp
Strand : -
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
GTGGACGGGGCACAGCGGCGGCTGACCAGCCTGCCGGGCGTCGGGCCGCGCCTGGCCGAACGCCTGGCACGGCTGGGCCT
GCACACGGTGGGCGACCTGCTGCTGCACCGCCCCATCCGCTACGAGGACCGCACCCGACTGCGGCCCATCGGCGGCCTGC
AGCCGGGCGAGCGGGTGCTGATCGAGGGGCGGGTGGAGTGGTCCGAGGTGGCACGGGGTCGGCGCAAGCGGCTGTTGTGC
CGGCTTAGCGACGGCACCGGGCAGCTTGATCTGGTCTTCTTCCACTTCCATCCGCGCCAGGCCGAGCGCCTCAGCCGCGG
CGTGGTGCTGCGCTGTTTCGGCGAGGTCCGGGCCGGCTACGGCGGCCTGCAAATGGCCCACCCGGAGCACCAGCGGGTGG
CCCCCGGGGACGCCGACGGCCCCGGCGAGGAGGCCCTGACCCCGGTCTATGCCAGCACCGACGGCCTTCACCAGGGGCAG
CTGCGCAAGCTGGTCGACGCCGCCCTGAGCCTCCTCCCCGGGGCGGCCCCGGAGTGCCTGCCCGATGCCGCTCGCGTGGA
TCCGCAGTGGCCGTCCCTGGCCGAGGCGCTGCGGACCGTCCACCGGCCGCCGCCGGAGGCCGACACCGAGACCCTGCTCG
CCGGCACCCATCCCGCGGTGCGCCGCGTGGCCTGCGAGGAGCTCCTCGCCCACCACCTGACCCTGCGTCGCCGGCGCCAG
GCGCTCCGCTCGGAGGCCGGCGCCCCGCCCTTGGACCAGGGCGAGGCGCTGGCCCAGCGTCTGCTGCAGAGCCTGCCCTT
CGCGCTGACGGGTGCCCAGCAGCGGGTGGATGGCGAGCTGGCTGAAGACATGGCCCGCTCGATGCCGATGCTGCGCCTGC
TCCAGGGCGACGTCGGCTCGGGTAAGACCGTGGTGGCGGCTCTGGCCTGCGCGCGCGCCGTCGGCAGTGGCTACCAGGCG
GCGCTGATGGCGCCCACCGAGCTGCTCGCCGAGCAGCACTGCCGCAGCCTGCAGGGCTGGTTCCAGCCGCTGGGCGTGGA
GGTCGCCTGGCTCTCCGGGGGTGCCCCGGCGGCCGAGCGCCGGGCGGCGCGTCAGCGCCTGGCCGAGGGGCGGGCCGGGA
TCGCCGTGGGCACCCACGCGCTGTTCCAGGAGGAGGTGCAGTTCCGCCGCCTGGGGCTGGTGGTGGTGGACGAGCAGCAC
CGCTTCGGGGTGCACCAGCGCCTGGCGCTCAAGGACAAGGGCGGTGGCGCCGAGCCGCATCAGCTGACCATGACCGCCAC
CCCCATCCCCCGGACGTTGGCCATGACCGCCTACGCCGACCTGGACGTCTCCTCGCTCGACGAGCGCCCCCCCGGGCGGA
CCCCGGTGAAGACGGTGGTGGTGGCCGAGCGGCGCCGCGCCGAGGTCATCGCGCGCATCCGCGCCGCCCTCGACGAGGGC
CGCCAGGCGTACTGGGTCTGCACCCTGATCGAGGCCTCGGACGAACTCGAGGCCCAGGCTGCCGAGGATACCGCCGCGGA
ACTCGATCGGGCGGTGGGCGATGCCCACCGGGTGGCCCTGGTCCACGGCCGCATGTCCCCCGCGGAGAAGGAGCGCACCA
TGGCGGCCTTCGCCCAGGGCGAGGTGGCGCTGCTGGTGGCCACCACGGTGATCGAGGTGGGGGTCGACGTGCCTAACGCC
AGTCTCATGGTCATCGATAACGCCGAGCGCCTCGGCCTGGCCCAGCTCCATCAGCTGCGCGGGCGGGTGGGCCGTGGTCG
CGCGGCGTCGACTTGTGTGCTCATGTATCATGGGCCGCTGTCCGAGAGCGCCCGGCAGCGGCTCGCCGTGTTGCGAGAGA
CCGACGATGGGTTCGCCATCGCCCGGCGGGATCTGGACATCCGCGGCCCCGGGGAGCTGCTGGGCACCCGGCAAACCGGG
GCGCTGAGCCTGCGCGTGGCCGACCTGCGCCGTGATGCGGACCTGCTGGAGGCGGTCCAGCAGGTGGGGGCCGAACTCCT
CGAGCAGGCCCCGGGGACCGCCGAGCAGCTGATCCGTCGGTGGGTCGGCGAGGCCGAGCGCTATGGGCAGGTGTGA

Protein sequence :
MDGAQRRLTSLPGVGPRLAERLARLGLHTVGDLLLHRPIRYEDRTRLRPIGGLQPGERVLIEGRVEWSEVARGRRKRLLC
RLSDGTGQLDLVFFHFHPRQAERLSRGVVLRCFGEVRAGYGGLQMAHPEHQRVAPGDADGPGEEALTPVYASTDGLHQGQ
LRKLVDAALSLLPGAAPECLPDAARVDPQWPSLAEALRTVHRPPPEADTETLLAGTHPAVRRVACEELLAHHLTLRRRRQ
ALRSEAGAPPLDQGEALAQRLLQSLPFALTGAQQRVDGELAEDMARSMPMLRLLQGDVGSGKTVVAALACARAVGSGYQA
ALMAPTELLAEQHCRSLQGWFQPLGVEVAWLSGGAPAAERRAARQRLAEGRAGIAVGTHALFQEEVQFRRLGLVVVDEQH
RFGVHQRLALKDKGGGAEPHQLTMTATPIPRTLAMTAYADLDVSSLDERPPGRTPVKTVVVAERRRAEVIARIRAALDEG
RQAYWVCTLIEASDELEAQAAEDTAAELDRAVGDAHRVALVHGRMSPAEKERTMAAFAQGEVALLVATTVIEVGVDVPNA
SLMVIDNAERLGLAQLHQLRGRVGRGRAASTCVLMYHGPLSESARQRLAVLRETDDGFAIARRDLDIRGPGELLGTRQTG
ALSLRVADLRRDADLLEAVQQVGAELLEQAPGTAEQLIRRWVGEAERYGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-93 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_0967 YP_001002545.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-160 59