Name : Hhal_0967 (Hhal_0967) Accession : YP_001002545.1 Strain : Halorhodospira halophila SL1 Genome accession: NC_008789 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1038190 - 1040265 bp Length : 2076 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : GTGGACGGGGCACAGCGGCGGCTGACCAGCCTGCCGGGCGTCGGGCCGCGCCTGGCCGAACGCCTGGCACGGCTGGGCCT GCACACGGTGGGCGACCTGCTGCTGCACCGCCCCATCCGCTACGAGGACCGCACCCGACTGCGGCCCATCGGCGGCCTGC AGCCGGGCGAGCGGGTGCTGATCGAGGGGCGGGTGGAGTGGTCCGAGGTGGCACGGGGTCGGCGCAAGCGGCTGTTGTGC CGGCTTAGCGACGGCACCGGGCAGCTTGATCTGGTCTTCTTCCACTTCCATCCGCGCCAGGCCGAGCGCCTCAGCCGCGG CGTGGTGCTGCGCTGTTTCGGCGAGGTCCGGGCCGGCTACGGCGGCCTGCAAATGGCCCACCCGGAGCACCAGCGGGTGG CCCCCGGGGACGCCGACGGCCCCGGCGAGGAGGCCCTGACCCCGGTCTATGCCAGCACCGACGGCCTTCACCAGGGGCAG CTGCGCAAGCTGGTCGACGCCGCCCTGAGCCTCCTCCCCGGGGCGGCCCCGGAGTGCCTGCCCGATGCCGCTCGCGTGGA TCCGCAGTGGCCGTCCCTGGCCGAGGCGCTGCGGACCGTCCACCGGCCGCCGCCGGAGGCCGACACCGAGACCCTGCTCG CCGGCACCCATCCCGCGGTGCGCCGCGTGGCCTGCGAGGAGCTCCTCGCCCACCACCTGACCCTGCGTCGCCGGCGCCAG GCGCTCCGCTCGGAGGCCGGCGCCCCGCCCTTGGACCAGGGCGAGGCGCTGGCCCAGCGTCTGCTGCAGAGCCTGCCCTT CGCGCTGACGGGTGCCCAGCAGCGGGTGGATGGCGAGCTGGCTGAAGACATGGCCCGCTCGATGCCGATGCTGCGCCTGC TCCAGGGCGACGTCGGCTCGGGTAAGACCGTGGTGGCGGCTCTGGCCTGCGCGCGCGCCGTCGGCAGTGGCTACCAGGCG GCGCTGATGGCGCCCACCGAGCTGCTCGCCGAGCAGCACTGCCGCAGCCTGCAGGGCTGGTTCCAGCCGCTGGGCGTGGA GGTCGCCTGGCTCTCCGGGGGTGCCCCGGCGGCCGAGCGCCGGGCGGCGCGTCAGCGCCTGGCCGAGGGGCGGGCCGGGA TCGCCGTGGGCACCCACGCGCTGTTCCAGGAGGAGGTGCAGTTCCGCCGCCTGGGGCTGGTGGTGGTGGACGAGCAGCAC CGCTTCGGGGTGCACCAGCGCCTGGCGCTCAAGGACAAGGGCGGTGGCGCCGAGCCGCATCAGCTGACCATGACCGCCAC CCCCATCCCCCGGACGTTGGCCATGACCGCCTACGCCGACCTGGACGTCTCCTCGCTCGACGAGCGCCCCCCCGGGCGGA CCCCGGTGAAGACGGTGGTGGTGGCCGAGCGGCGCCGCGCCGAGGTCATCGCGCGCATCCGCGCCGCCCTCGACGAGGGC CGCCAGGCGTACTGGGTCTGCACCCTGATCGAGGCCTCGGACGAACTCGAGGCCCAGGCTGCCGAGGATACCGCCGCGGA ACTCGATCGGGCGGTGGGCGATGCCCACCGGGTGGCCCTGGTCCACGGCCGCATGTCCCCCGCGGAGAAGGAGCGCACCA TGGCGGCCTTCGCCCAGGGCGAGGTGGCGCTGCTGGTGGCCACCACGGTGATCGAGGTGGGGGTCGACGTGCCTAACGCC AGTCTCATGGTCATCGATAACGCCGAGCGCCTCGGCCTGGCCCAGCTCCATCAGCTGCGCGGGCGGGTGGGCCGTGGTCG CGCGGCGTCGACTTGTGTGCTCATGTATCATGGGCCGCTGTCCGAGAGCGCCCGGCAGCGGCTCGCCGTGTTGCGAGAGA CCGACGATGGGTTCGCCATCGCCCGGCGGGATCTGGACATCCGCGGCCCCGGGGAGCTGCTGGGCACCCGGCAAACCGGG GCGCTGAGCCTGCGCGTGGCCGACCTGCGCCGTGATGCGGACCTGCTGGAGGCGGTCCAGCAGGTGGGGGCCGAACTCCT CGAGCAGGCCCCGGGGACCGCCGAGCAGCTGATCCGTCGGTGGGTCGGCGAGGCCGAGCGCTATGGGCAGGTGTGA Protein sequence : MDGAQRRLTSLPGVGPRLAERLARLGLHTVGDLLLHRPIRYEDRTRLRPIGGLQPGERVLIEGRVEWSEVARGRRKRLLC RLSDGTGQLDLVFFHFHPRQAERLSRGVVLRCFGEVRAGYGGLQMAHPEHQRVAPGDADGPGEEALTPVYASTDGLHQGQ LRKLVDAALSLLPGAAPECLPDAARVDPQWPSLAEALRTVHRPPPEADTETLLAGTHPAVRRVACEELLAHHLTLRRRRQ ALRSEAGAPPLDQGEALAQRLLQSLPFALTGAQQRVDGELAEDMARSMPMLRLLQGDVGSGKTVVAALACARAVGSGYQA ALMAPTELLAEQHCRSLQGWFQPLGVEVAWLSGGAPAAERRAARQRLAEGRAGIAVGTHALFQEEVQFRRLGLVVVDEQH RFGVHQRLALKDKGGGAEPHQLTMTATPIPRTLAMTAYADLDVSSLDERPPGRTPVKTVVVAERRRAEVIARIRAALDEG RQAYWVCTLIEASDELEAQAAEDTAAELDRAVGDAHRVALVHGRMSPAEKERTMAAFAQGEVALLVATTVIEVGVDVPNA SLMVIDNAERLGLAQLHQLRGRVGRGRAASTCVLMYHGPLSESARQRLAVLRETDDGFAIARRDLDIRGPGELLGTRQTG ALSLRVADLRRDADLLEAVQQVGAELLEQAPGTAEQLIRRWVGEAERYGQV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-93 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Hhal_0967 | YP_001002545.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-160 | 59 |