|
Name : rplS (CJJ81176_0737) Accession : YP_001000410.1 Strain : Campylobacter jejuni 81-176 Genome accession: NC_008787 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 664640 - 664996 bp Length : 357 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAAAAATAAATATATAGAACAATTTGAAGCAAAACAAATTGAAGGTAAAAATGTTCCAGATTTTCGTGCTGGTGATAC TTTAAAGCTTGCAATTCGCATCAAAGAAGGGGATAAAACAAGAATCCAAAATTTTGAGGGTATTTGTATTGCTAGAAGAG GTAATGGAGTAAGTGAAACTTTTATCGTGCGTAAAATGGGCGCTAATAATGTTGGCGTTGAGAGAATTTTCCCTATTTAT AGTGAAAGTTTAGAAAGTATTACTGTTTTGCGTCGTGGTCGTGTACGCCGTGCAAGATTATTCTACTTAAGAGATAGACG CGGTAAAGCAGCGCGTATTAAAGAGCTTAAAAAATAA Protein sequence : MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKMGANNVGVERIFPIY SESLESITVLRRGRVRRARLFYLRDRRGKAARIKELKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-15 | 53 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-13 | 51 |
