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Name : serS (CJJ81176_0412) Accession : YP_001000100.1 Strain : Campylobacter jejuni 81-176 Genome accession: NC_008787 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 357345 - 358580 bp Length : 1236 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATTTAAAAAATTTGCAAAATAATTTTGATGAAGTGGCTAAAAAGTTAAAAAATAAAAAAGTTGATGAAAATAT CTTAAAAAAACTTGCTGAACTTTTTGCAAGTTTAAAAAAAGAAAAAACAGCTTTAGAAGAATTTCAAGCTTTTCAAAATA AATTCAGTAAAGAGCTTGCTACAGCCGAAGATAAAGAAAGTTTAAAAGCAAAATTAAGCGAAAATAAAAGTAAAATTAAT GAGCAAAGCGCTAAAGTAAATGCTTTAGAAAATGAGCTTGAAGAAATCGCTCATGCCATCCCAAATATCCCTGATGAGTG TGTGCCTGTGGGTGAAGACGAAGATGAAAATGTGGAGCTTAAAAAAGTTTTAAATCCATCTAGCTTTGATTTTACTCCAA AAGAACATTTTGAATTAGGTGAGAGTTTAAATTGGCTTGATTTTGTGCGTGGGGTAAAAATTTCACAAAGTCGTTTTTGT GTGCTTAAAAACGAAGGAGCTTTATTAAGCCGCGCTTTGGTAAATTATATGATAGATTTTAATAGAAGTCGTGGATTTGA ATTTGTTAATGTGCCTTTTTTGGTAAATGGTGCTACTATGTTTGGGACAGGTCAGTTGCCAAAATTTAAAGAAGATATGT ATAAGGTAGATGATGAGGATTTGTATTTGATCTCAACTTCTGAAATTCCAGTAACCAATCTTTATAGTGGAGAAATTTTA GCGAGTGAAACTTTACCGATAAAAATGACTTGTTATAGCGCTTGTTTTAGAAAAGAAGCAGGCAGTGCAGGGCGTGATAC AAGAGGTATTATAAGACAACACCAGTTTGAAAAAGTAGAGCTTGTAAGTATTACTAAACCTGAGCAAAGTGATAGCGTGT TTAATGAAATGCTTGAGTGTGCAAGTGATTTACTCAGTTCTTTAGGTTTAGCGCATAGACATTTGATGCTTTGCACCGGA GATTTGGGTTTTAGTGCAGCAAAAACTGTGGATCTTGAAGTGTGGCTTCCAGGACAAAATAAATATCGTGAGATCAGTTC TGTTTCAAATTGTCGTGATTTTCAAGCAAGACGCGCTAAAATTCGCTATAAAAACGAACAAGGAAAAAATGAACTTGTTC ACACTCTTAATGGCTCATCTTTGGCAGTAGGAAGAACCTTGGTAGCGATTATGGAAAATTATCAAGATAAAGAAGGAAAA ATTCATATTCCTGATGTTTTGAAAAAATATTTTTAA Protein sequence : MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELATAEDKESLKAKLSENKSKIN EQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDENVELKKVLNPSSFDFTPKEHFELGESLNWLDFVRGVKISQSRFC VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTNLYSGEIL ASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTG DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGK IHIPDVLKKYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-86 | 49 |
