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Name : CJJ81176_1539 (CJJ81176_1539) Accession : YP_001001194.1 Strain : Campylobacter jejuni 81-176 Genome accession: NC_008787 Putative virulence/resistance : Unknown Product : type I restriction-modification system, M subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1461824 - 1463326 bp Length : 1503 bp Strand : - Note : identified by match to protein family HMM PF02384 DNA sequence : ATGGCAAAGAAAAAAGAAATAAAACTAGAAGATGCGTTATGGAAAAGTGCTGATAAATTACGCAAAAATATCGACGCAGC AGAGTATAAACACATAGTTTTAGGACTTATATTTTTACGCTACATTAGCGATAGCTTTATGCAAAAATACGAAGAGTTAT TAAAAGAACAAGATGATGGAGCCGACCCAGAAGATGCAGATGAATACCTAGCTGACAATATCTTCTTCGTTCCAGAAAAA TCTCGCTACAACTACATAAGAGATAACGCCAAAAATCCCAAAATAGGCAAAATGCTAGATGAAGCAATGGACGAGATAGA AAAACACAACGATACTCTAAAAGGAGTTTTGCCAAAAGTCTATGCCAAAGATAACTTAGATAGTAAATGCCTAGGCGAAC TTATAGATCTTATAGGAAATATCGCCTTTGACACTGGTAAAAGCACCGATGTTTTAGGTCATGTATTTGAGTATTTTTTA GGTGAATTTGCCCTAGCTGAAGGCAAACAAGGCGGACAATTCTACACTCCAAAATGCGTCGTAGAGCTCCTAGTAACTAT GCTTGAGCCATATAAAGGCAGAGTGTTTGATCCTTGCTGTGGAAGTGGCGGTATGTTTGTTCAAAGCGAAGAGTTTGTAA AATCTCACCAAGGCAGACTAGATGACATCTCAATCTATGGTCAAGAGTCAAATCAGACTACCTACAAACTCGCCAAAATG AACCTAGCCATAAGAAAAATCGAAAGCTCACAAGTGATATGGAACAACGAAGGCTCATTTTTAAACGACGCTCATAAAGA CTTAAAAGCCGATTTTATTATAGCCAATCCACCATTTAACGACTCGGACTGGAGCGGCGAACTGTTAGAAAACGATGGCA GATGGAAATACGGCGTCCCACCAGCAAGCAACGCCAACTACGCTTGGATACAGCACTTTTTATATCATCTATCACCAAAC GGCGGTGTAGCGGGATTTGTCCTAGCTAAAGGCGCACTTACAAGCAACACCACAAATGAAGCAGCCATTAGAAAAGCACT TATTGAAGATGATTTGATAGATTGTATAGTAAATCTACCCGCAAAGCTGTTTTTAAATACAGGTATTCCTGCATCACTTT GGTTTATAAGACGCCAAAAGCTACCAAAGACAGTCAAAAAAACGCTTTTTATAGATGCAAGAGATTTAGGAACTAGGATA AATAGACGCAACAAAACCCTAAACAAAGACGATATAAACCAAATCGCAAATATTTATAAAGCATGGAAAAACGGCACTGA TTATGAAGACATAAAAGGCTTTTGTAAAAGTGTTAGCATAGATGAGATAAGAGAGCTTTCTTATGTGCTTACCCCAGGGC GTTATGTGGGGCTTGCTGATAGTGATGATGAGTTTGATTTTGATACTAGATTTAACGAGCTTTTAGCAAAGTTAAAATCC CAAATCAAAACTGAGCAAGAGCTAAGTGAAATTATCTTAAAAAACTTAGAGAAGATTAAATGA Protein sequence : MAKKKEIKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDADEYLADNIFFVPEK SRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNLDSKCLGELIDLIGNIAFDTGKSTDVLGHVFEYFL GEFALAEGKQGGQFYTPKCVVELLVTMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKM NLAIRKIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNANYAWIQHFLYHLSPN GGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFLNTGIPASLWFIRRQKLPKTVKKTLFIDARDLGTRI NRRNKTLNKDDINQIANIYKAWKNGTDYEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFDFDTRFNELLAKLKS QIKTEQELSEIILKNLEKIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 5e-132 | 55 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 2e-131 | 55 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 3e-132 | 55 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 8e-103 | 42 |
