Gene Information

Name : Veis_0985 (Veis_0985)
Accession : YP_995780.1
Strain : Verminephrobacter eiseniae EF01-2
Genome accession: NC_008786
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 1097124 - 1098542 bp
Length : 1419 bp
Strand : +
Note : KEGG: rfr:Rfer_2580 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase

DNA sequence :
ATGTCCGCCATCTTTCCCCCGCTCGATGACGATGGCTCGACGGCGCAGCCGCCCGATCCCGAACTGGCCCGGTTGCGCCT
GCCACCGCACTCGATCGAGGCCGAATCCAGCGTGCTCGGCGGGCTGCTGCTGGACAACAATGCCTGGGACCGCGTCGGTG
ACCTGCTGGTGCAAAGCCATTTTTACCGCCATGAGCACCAGATGATCTACACCGCCATCGGCGTGCTGATCACTGCCAGC
AAGCCGGCCGACGTGATCACCGTGTTCGAGCAGTTGCAGAACCTGGGCCAGGCCCAGGAAACGGGGGGGCTGGCGTATTT
GAACAACCTCGCGCAATATGTGCCGGGCGCCAGCAACATCCGCCGCTATGCGGAGATCGTGCGCGAGCGGGCCATTTTGC
GCAAGCTGATCACGACCAGCGACGAGATCTGCACCAGCGCCTTCAACCCGCAAGGCCGGACGGTGGAGCGCATTCTCGAC
GAGGCCGAAGCCAGGATTTTTGCCATTGGCGAAGAAGGCTCGCGCACCAAGCAGGGTTTCCAGTCGCTCGACAAACTGGT
GGTCGATCTGCTCGACCGCGTGCAGGAGTTGGCCGACAACCCGGTGGACGTGACCGGCGTGCCCACCGGCTTTGCCGATC
TCGACCGGATGACCTGCGGCCTGCAGGCGGGCGACCTGGTGGTGCTGGCCGCGCGCCCGTCGATGGGCAAGACCTCGCTG
GCGGTGAACATTGCCGAGCATGTGGCGCTCGATGAGGGCCTGCCGGTGGCCATCTTCTCTATGGAAATGGGCGCCGCGCA
ACTGGCGGTGCGCATCGTGGGCTCGATTGGCCGCGTGAACCAGGGCAACCTGCGCACCGGCCGGCTCAGCGATGAGGAGT
GGCCACGCCTGACCGAAGCCATTGAAAAGCTGCGCACGGTGTCGCTGCACATCGACGAAACCCCGGGCCTGACGCCCAGC
GAACTGCGCGCCAATGCCCGGCGTCTGGCGCGCCAGTGCGGCAAGCTCGGCCTGATCGTGGTGGACTATTTGCAGTTGAT
GAGCGGCTCGGACGCATCAGGTTCGGACAACCGGGCCACCGAACTGGGCGAGATCTCGCGCGGCCTGAAAATGCTGGCCA
AGGAACTGCAATGCCCGGTGATGGCGCTCTCGCAGCTCAATCGCTCGGTCGAGCAGCGCACCGACAAACGCCCGCTGATG
TCCGACCTGCGCGAGTCCGGCGCCATCGAGCAAGATGCCGACATCATCATGTTCATCTACCGCGACGACTACTACAACAA
GGAGAGCAAGGAACCGAACGTGGCCGAAATCATCATCGGCAAGCAGCGCAATGGCCCGACCGGCACGGTCAAGCTGTTCT
TCCAGAAGAACCAGACGCGCTTCGAGAACCTGGCCATCGGTTCGGGCGACGATTTTTGA

Protein sequence :
MSAIFPPLDDDGSTAQPPDPELARLRLPPHSIEAESSVLGGLLLDNNAWDRVGDLLVQSHFYRHEHQMIYTAIGVLITAS
KPADVITVFEQLQNLGQAQETGGLAYLNNLAQYVPGASNIRRYAEIVRERAILRKLITTSDEICTSAFNPQGRTVERILD
EAEARIFAIGEEGSRTKQGFQSLDKLVVDLLDRVQELADNPVDVTGVPTGFADLDRMTCGLQAGDLVVLAARPSMGKTSL
AVNIAEHVALDEGLPVAIFSMEMGAAQLAVRIVGSIGRVNQGNLRTGRLSDEEWPRLTEAIEKLRTVSLHIDETPGLTPS
ELRANARRLARQCGKLGLIVVDYLQLMSGSDASGSDNRATELGEISRGLKMLAKELQCPVMALSQLNRSVEQRTDKRPLM
SDLRESGAIEQDADIIMFIYRDDYYNKESKEPNVAEIIIGKQRNGPTGTVKLFFQKNQTRFENLAIGSGDDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-97 50
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-80 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-82 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-82 45
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 5e-83 45
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 7e-83 45
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-77 44
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-82 44