Gene Information

Name : Veis_0006 (Veis_0006)
Accession : YP_994817.1
Strain : Verminephrobacter eiseniae EF01-2
Genome accession: NC_008786
Putative virulence/resistance : Unknown
Product : type III restriction enzyme, res subunit
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 8724 - 11030 bp
Length : 2307 bp
Strand : +
Note : PFAM: type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dde:Dde_2493 DEAD/DEAH box helicase-like

DNA sequence :
GTGTGCCAGTACTTGGAGGCCAATGGCGTCAAATGGCGCACGCCTCAACCTCCGGTAGATCGCGCTCCACCCCCTCCGTT
CGCCAAGCTGTCTACGGACGAAAAGGTCCGCCTGTTTCGCGGTCTCTTCCGAGGACGGACTGACGTCTATCCTGTCCGCT
GGGAGAGCAAGACAACGGGCAAATCAGGCTACGCGCCGGCGTGCCTGAACGAGTGGGCGGCGGGCATCTGCCACAAGCCC
AGGATCAAATGCGCCGATTGCGAGCATCGGTCCCTCGCGTCCATCACGGACCCGGTGATCTACGATCACCTGGCAGGCGA
GCACACGGTCGGAATCTACCCACTTCTCCACGACAACACCTGCCACTTCTTGGCGGTCGACTTCGACGAGCAGGAGTGGC
GCGAGGACGCCCTGGCATTCGTCGAGTCCTGCCGGACGCTTGGGGTTCCTGCTGCGCTGGAGATTTCCCGTTCGGGCGAT
GGGGCCCACGTCTGGCTCTTCTTTTCGCAGAAGGTCGACGCGCGTGATGCCCGTCGCCTCGGGACCGCCCTCATCAGCCA
TGTCTGTGCGCGGACCCGGCAGTTGAAGCTGAGCTCCTACGACCGGCTGCTCCCCAACCAGGACACGATGCCAAAAGGGG
GCTTCGGCAATCTGATTGCGCTACCGCTCCAGAAAAAGCCGCGCGACGCTGGCCGCAGCGTATTTGTCGATGACGAGTTT
CTTCCTTATCCGGATCAATGGGGCTTTCTGGCATCCGTGCGCCGCATGCCTGTCGAAGACATCGAGCCCACAATCCTGCA
GGCGACAGGAGGTTCGCACCCACTGGACGTGACCTTCATCGAAGACGAGGACCACCAGACGCCGTGGCTCACGCCACTGC
GAACCAGCAAGAAGATTTCCGGGCCTCTGCCCGAGAGTCTCCACCTGACGCTCGCCAACCTGGTCTACTTCCCGAAAGAG
GGGCTCCCTCAGGCATTGGCCAACCGTCTCATTCGCTTGGCGGCCTTCCAGAACCCGGAGTTCTACAAGGCACAAGCCAT
GCGCTTCGCGGTCTGGGACAAACCGCGCGTCATCGGGTGCGCAGAGAACTACCCCAACCACATCGCATTGCCGCGCGGTT
GCCTGGACGACGCGGTCTCCTTGCTGGCCGCCAACGGCATCCGTGCCGTTGTCCAGGACGAGCGCTTCCAGGGCGCGCAG
ATCGACGTGCGCTTCGCTGGCACGCTGCGCGACGACCAGGAGGTCGCGGTGGGGGCGACACTGCAGCACGACACCGGCGT
CCTCTGCGCACCGACCGCCTTCGGCAAGACCGTCACGGCCGCGGCGGTGATTGCCAGGCGCGGCGTGAACACCCTGGTTC
TGGTCCATCGCACGGAACTGCTGACGCAGTGGCAAGAACGGCTGCAGAGTTTCCTTGCCGCCGACAAGAACGTGATTGGC
CGGATTGGTGGTGGCAAGTCCAAGCCCACCGGGAAAATCGACATCGCGGTGATGCAGTCTCTGGCAAGGAACGAAGAACT
CAGCGCGCTGCTCGACAACTATGGCCAGGTCATCGTCGACGAGTGCCATCACATCGGAGCCGTATCGTTTGACTTGCTGC
TGCGACGGGCCAAGGCGAAGTACGTCCTCGGCCTCACCGCGACCCCCGTGCGTCGCGATGGCCAGCACCCCATCATCTTC
ATGCAGTGCGGGCCGATCCGGCACACGGCCCAGAGGCCGGACAGCGCGCCACAACGGATGGAGTTCCATCCGATTCGCGT
GGCAGGGTCTCTTGAGGTTCCAGGTGACGCGGGAATTCAGGACATCTTCACCAGCCTCGTGAATGACGTGCGCCGAACGC
GGGAGATTGTTGATGCGGTCCTTGAGTGCTACGGCCAGGGGCGCAAGATTCTGGTCCTGACAGAACGCACAGATCACATT
GCCACCCTTGCTGACGCCTTTCGGAAGATTGCGCCTCGCATCTTCATCCTGCACGGTCGCATGTCGCGAAAGGAGCGCAT
GGCGACCACGGCCGAACTGGACCAATTGCCGCCGACTGCTGCCAGGATTCTGCTCGCATCAGGGAAACTGGTCGGGGAAG
GTTTTGACCACCCAGCGCTGGACACACTGGCTTTGGCCATGCCGGTGTCATGGAGGGGAACGTTGCAGCAGTACGCCGGC
CGGCTGCACCGGGAACACAGCGCAAAAACCGATGTCCGCATTCTGGATTTCGTCGATACGGGTCACCCGGCGCTCCACCG
CATGTGGGAGAAAAGGCTGCGGGGCTACAGCGCGATGGGCTACTCCATCGCACCGAGGCTTGTCTGA

Protein sequence :
MCQYLEANGVKWRTPQPPVDRAPPPPFAKLSTDEKVRLFRGLFRGRTDVYPVRWESKTTGKSGYAPACLNEWAAGICHKP
RIKCADCEHRSLASITDPVIYDHLAGEHTVGIYPLLHDNTCHFLAVDFDEQEWREDALAFVESCRTLGVPAALEISRSGD
GAHVWLFFSQKVDARDARRLGTALISHVCARTRQLKLSSYDRLLPNQDTMPKGGFGNLIALPLQKKPRDAGRSVFVDDEF
LPYPDQWGFLASVRRMPVEDIEPTILQATGGSHPLDVTFIEDEDHQTPWLTPLRTSKKISGPLPESLHLTLANLVYFPKE
GLPQALANRLIRLAAFQNPEFYKAQAMRFAVWDKPRVIGCAENYPNHIALPRGCLDDAVSLLAANGIRAVVQDERFQGAQ
IDVRFAGTLRDDQEVAVGATLQHDTGVLCAPTAFGKTVTAAAVIARRGVNTLVLVHRTELLTQWQERLQSFLAADKNVIG
RIGGGKSKPTGKIDIAVMQSLARNEELSALLDNYGQVIVDECHHIGAVSFDLLLRRAKAKYVLGLTATPVRRDGQHPIIF
MQCGPIRHTAQRPDSAPQRMEFHPIRVAGSLEVPGDAGIQDIFTSLVNDVRRTREIVDAVLECYGQGRKILVLTERTDHI
ATLADAFRKIAPRIFILHGRMSRKERMATTAELDQLPPTAARILLASGKLVGEGFDHPALDTLALAMPVSWRGTLQQYAG
RLHREHSAKTDVRILDFVDTGHPALHRMWEKRLRGYSAMGYSIAPRLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 0.0 64
Z1568 NP_287072.1 helicase Not tested TAI Protein 0.0 64