Gene Information

Name : Veis_4683 (Veis_4683)
Accession : YP_999398.1
Strain : Verminephrobacter eiseniae EF01-2
Genome accession: NC_008786
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 5170346 - 5171194 bp
Length : 849 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: psb:Psyr_3810 integrase, catalytic region

DNA sequence :
GTGCAGTGCCGAGTCCTGCAGGCCAGCATCACCGGCTACCACGAACACTTCGTTCGTAGAGCCAGCGCGGCCCAGCGGCA
CCATCTCAGCGACGACGCGCTGCTGGTGCACATCGAGGTGATCCACGCCGAAACGCGGGGCGGCTACGGCTGGCCGCGCA
CGTGGAAGGAACTGCTGGCCAGGGGCATCCGGGTGGGCAAGGAGCGGGTGCGCAAGCTCATGCAACTGCACGGCATCCAG
GCCAAGGGCAAGCGCCGCTTCAAGGTCACCACGGACAGCAAGCATGACCTGCCGATCGCCCCCAATCTGCTGGATCGGCA
GTTCGATGTGGCCGAACCCGACAAGGTCTGGGTGGGCGACATCACCTACATCGCAACCGACGAAGGCTGGCTGTTCCTGG
CCGTGGTGATCGACCTGTTCAGCCGCCAGGTGGTGGGCTGGTCACTGCGCCAGGACATGACGCGCGACATCGTCATCGAT
GCTGTGCGCATGGCCTGGTTCAAGCGCCATCCGCGCAAGCATGCCGGGCTGATCTTCCACAGCGACCGGGGCAGCCAATA
CGCCAGCGAGGACTTCAGGGACGTGCTCGTCCAGTGCGGCATCACGGCCTCGATGAGCCGCAAGGGCAACTGCTGGGACA
ACGCCTGCAGCGAGACCCTGTTCGGTTCGTTGAAGGTGGAGCGACTGCATGGGCAGCGCTTCGTGACGCGGCGCCAGGCC
AAGGACGAGGTCATCGCCTGGGTACTCTGGTACAACCGCACCCGGCTACACTCCACGCTGGCGTACGTCAGCCCGGCGCG
GTTCGAGCAAGACTGGCATGCGGCTCAGGCCAAGCAAGCCAATTCGTGA

Protein sequence :
MQCRVLQASITGYHEHFVRRASAAQRHHLSDDALLVHIEVIHAETRGGYGWPRTWKELLARGIRVGKERVRKLMQLHGIQ
AKGKRRFKVTTDSKHDLPIAPNLLDRQFDVAEPDKVWVGDITYIATDEGWLFLAVVIDLFSRQVVGWSLRQDMTRDIVID
AVRMAWFKRHPRKHAGLIFHSDRGSQYASEDFRDVLVQCGITASMSRKGNCWDNACSETLFGSLKVERLHGQRFVTRRQA
KDEVIAWVLWYNRTRLHSTLAYVSPARFEQDWHAAQAKQANS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 4e-46 43
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 3e-46 43
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-46 43
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-46 43
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 4e-46 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 4e-46 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 8e-46 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 7e-46 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 4e-46 42
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-37 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 5e-35 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-35 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Veis_4683 YP_999398.1 integrase catalytic subunit VFG1706 Protein 2e-46 43
Veis_4683 YP_999398.1 integrase catalytic subunit VFG1631 Protein 1e-37 41