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Name : Veis_3131 (Veis_3131) Accession : YP_997880.1 Strain : Verminephrobacter eiseniae EF01-2 Genome accession: NC_008786 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 3479380 - 3482562 bp Length : 3183 bp Strand : + Note : KEGG: xom:XOO_3254 type I restriction-modification system endonuclease; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like DNA sequence : ATGGCGTTTTTGGCCGAAGCCGACATTGAGCAAGCCCTGCTGACGCAGTTGCGCAGACTAGGCTACTCCATCGCATCCGA CGATGTCATTGGTCCGGACGGCAACGCGCCGGAACGCGAAAGCCACGATGTCGTCGTGCTGCATAAGCGGCTGGAAACCG CTGTGCTGCGGCTCAATCCCGCTTTGCCGCCGGAAGCGCGGGCAGATGCCATTCGCAAACTGACTCAATCGGAATTCCCC GCCCTGCTGGAAGAAAATCGTCGCATCCACACCCTGCTGACCGAGGGCGTGGACGTTGAATACTACGGCGACGATGGTGT ACTGACGGCGGGCAAGGTTCGGTTGCTGGATTTCGATACACCGGAAAACAACGACTGGTTGGCCGTGCAGCAGTTCGTGG TCATCAACGGCCAAGTCAACCGCAGGCCGGATGTGGTGCTGTTCGTCAACGGCCTGCCGCTGGCGGTCATCGAACTCAAA GCGCCGGGCAGCGCGGGCGCGCATCTGGCGGGCGCGTTCAACCAGTTGCAGACTTACAAGCAGCAGATTCCGGCGCTGTT TCACACCAATGCGCTGCTGGTCACTTCGGACGGCATTGCCGCGCGCGTGGGGTCGCTGTCCGCCGATCTGGAACGCTTCA TGCCGTGGCGCACCACGGATGGCAGCGCGATTGCGCCCAAGGGTTCGCCGGAGTTGGCAACGCTGATCGAGGGCGTGTTC GCGCCGCAACGCTTCCTCGACCTGCTACGGTATTTCACCGTATTCGGCGAGACCGGCTCGGGTCTTACGAAGATCGTGGC GGGCTATCACCAGTTCCACGCGGTCAATCGTGCCGTCGAATCCACCATTCGCGCATCAAGCCAATGGCAGGGCGTGCGCG AGGAACCGGCCTCGTATGGCCTGCCCAGCGTGGCGATGCAAGCCCGTGGCGACCGGCGCGCGGGCGTGATCTGGCACACG CAAGGCTCCGGCAAAAGCCTGCTGATGGCCTTTTACGCCGGGCGGCTGGTGCAGCACCCGGCGATGGAGAACCCGACGCT CGTCGTGCTGACCGACCGCAACGATCTGGACGACCAGTTGTTCTCCACCTTCTCGATGTGCCGCGACCTGATCCGGCAGA AACCGGTGCAGGCCGAAGGCCGCGAGCATTTGCAACAACTGCTGGCGCGCGCTTCCGGCGGCGTGATCTTCACTACCTTG CAGAAGTTTGGCGAGGTAGCCGAGCCGCTGACCACGCGGCGCAATGTGGTCGTCATCGCCGACGAAGCACACCGTTCGCA ATACGGTTTCCGCGCGAAGGTGGATGCCAAGACTGGCGAGGTGAGCTACGGCTTCGCCAAATACCTGCGCGATGCGCTGC CCAATGCCTCGTTCATCGGCTTTACGGGCACGCCCATCGAGGCGACGGACGTGAACACCCTGGCGGTGTTCGGCAACTAC ATCGACGTGTACGACATCAGCCGCGCGGTGGAAGACGGCGCGACCGTGCCGATCTACTACGAATCGAGGCTGGCGCGCAT CGAACTCGACGAGGACGAAAAGCCCAAGCTCAACGCCGAAGTCGAGGCGTTGACCGAGGACGAGGCCGTCACCGAGCAGG AAAAGCTGAAGGCGAAATGGGCAACGGTCGAAAAACTGGTCGGCAGTGACAAACGCCTCGCGCTGGTGGCGCAGGATTTG GTGGCGCATTTCGAGGACAGGCTGACCGCGCTGGACGGCAAGGCCATGGTGGTGTGCATGAGCCGCCGTATCGCCGTAGC GCTATACGATGAAATCATCAAGCTGCGCCCGGACTGGCACAGCACGGACGATGCCGCAGGCGCGGTGAAAATCGTGATGA CCGGTGCGGCCAGCGACCCACCCGCTTGGCAGCAGCACATCGGCAACAAGGCGCGGCGCGATCTGCTGGCCAAGCGTGCG CGTGACGCGAAAGACCCGCTGAAACTGGTCATCGTGCGTGATATGTGGCTGACCGGCTTTGACGCGCCGTGCATGCACAC GATGTATGTCGATAAACCGATGCAGGGTCACGGGCTGATGCAGGCCATCGCGCGCGTGAACCGCGTGTTCCTCGACAAGC CTGCTGGGTTGATCGTGGACTACATCGGCATCGCGCAAAGCCTGAAATCCGCGCTGGCGCAGTATTCGGCGGGTGACCGA GCCAACACCGGTGTGGACGAAGCGCAGGCCGTGGCGGTGATGCAGGAGAAGTACGAAGTAGTGCGCGACATGTACCACGG CTTCGACTACGCCACCGCCTTGAACGGCACGCCGCAGCAGCGGCTGGCGATGATGGCTGGTGCCATCGAGTGGATACTCG ACAAGCAGCAGCAATGGACGGCTGCGGAAACCACGGATGAAGGCAAGAAGAACGCCCAGCGCCGCTATCAGGATGCGGTG CTGGCCTTGTCGAAGGCGTACTCGCTGGCGTCGGCTTCGGACGAGGCGCGCGGCATCCGCGAGGAGATTGGCTTCTTCCA GGCCATCCGTGCGGCGCTGGTGAAGTCGGCGACAGGCTCGGGCGTCACCTCGCAGGAGCGCGACTTCGCTATCCAGCAGA TCGTCAGCCGCGCAGTGATTTCGACCGAGATCGTGGACATCCTCAAGGCGGCGGGCATCCAAAGCCCGGACCTCTCCATC CTGTCCGACGAGTTCCTCGCCGAAGTGCAGCAGATGCAGAAGAAGAACCTTGCGCTGGAAGCCTTGCGCAAGCTCATCAA CGACGGCATCCGCTCGCGCAGCAAGGCCAACATCGTGCAGACACGCGCGTTCTCGGAGCGGCTGGAAGATGCCGTGGCGC GCTACCACGCCAATGCCATCACCACCGCCGAAGTGTTGCAGGAACTGATTCAGTTGGCGAAGGACATCCGCGCGGCGCGG CAGCGTGGCGAAGAAGCGGGCCTGTCCGATGAGGAAATCGCCTTCTACGACGCGCTGGCCGAAAACGAAAGTGCGGTGCA GGCAATGGGCGACGACAAGCTCAAGGTCATTGCCCACGAATTGCTGGGCAGCCTGAAAGGGAACGTGTCCGTGGATTGGG CGCATCGCGATTCGGCGCGCGCCCGGATGCGGGTGCTGGTCAAGCGCATTCTGCGCAAATACGGTTATCCGCCGGATTTG CAGGATGCGGCGGTGCAGACCGTGCTGCAGCAGGCCGAGGCGCTCTCGGCTGGATGGATTTAG Protein sequence : MAFLAEADIEQALLTQLRRLGYSIASDDVIGPDGNAPERESHDVVVLHKRLETAVLRLNPALPPEARADAIRKLTQSEFP ALLEENRRIHTLLTEGVDVEYYGDDGVLTAGKVRLLDFDTPENNDWLAVQQFVVINGQVNRRPDVVLFVNGLPLAVIELK APGSAGAHLAGAFNQLQTYKQQIPALFHTNALLVTSDGIAARVGSLSADLERFMPWRTTDGSAIAPKGSPELATLIEGVF APQRFLDLLRYFTVFGETGSGLTKIVAGYHQFHAVNRAVESTIRASSQWQGVREEPASYGLPSVAMQARGDRRAGVIWHT QGSGKSLLMAFYAGRLVQHPAMENPTLVVLTDRNDLDDQLFSTFSMCRDLIRQKPVQAEGREHLQQLLARASGGVIFTTL QKFGEVAEPLTTRRNVVVIADEAHRSQYGFRAKVDAKTGEVSYGFAKYLRDALPNASFIGFTGTPIEATDVNTLAVFGNY IDVYDISRAVEDGATVPIYYESRLARIELDEDEKPKLNAEVEALTEDEAVTEQEKLKAKWATVEKLVGSDKRLALVAQDL VAHFEDRLTALDGKAMVVCMSRRIAVALYDEIIKLRPDWHSTDDAAGAVKIVMTGAASDPPAWQQHIGNKARRDLLAKRA RDAKDPLKLVIVRDMWLTGFDAPCMHTMYVDKPMQGHGLMQAIARVNRVFLDKPAGLIVDYIGIAQSLKSALAQYSAGDR ANTGVDEAQAVAVMQEKYEVVRDMYHGFDYATALNGTPQQRLAMMAGAIEWILDKQQQWTAAETTDEGKKNAQRRYQDAV LALSKAYSLASASDEARGIREEIGFFQAIRAALVKSATGSGVTSQERDFAIQQIVSRAVISTEIVDILKAAGIQSPDLSI LSDEFLAEVQQMQKKNLALEALRKLINDGIRSRSKANIVQTRAFSERLEDAVARYHANAITTAEVLQELIQLAKDIRAAR QRGEEAGLSDEEIAFYDALAENESAVQAMGDDKLKVIAHELLGSLKGNVSVDWAHRDSARARMRVLVKRILRKYGYPPDL QDAAVQTVLQQAEALSAGWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
