Gene Information

Name : Veis_1716 (Veis_1716)
Accession : YP_996489.1
Strain : Verminephrobacter eiseniae EF01-2
Genome accession: NC_008786
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1914059 - 1914970 bp
Length : 912 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: pol:Bpro_3191 tyrosine recombinase XerD

DNA sequence : 
ATGCCCGATCCCGACGCCATCGATGCTTTCCTGGACGCCCTTTGGCTCGAGGACGGGCTGGCGCGCAACACGCTGGCCGC
ATACCGGAGCGACCTGACGCGGTATGCGCAGTGGCTGCACGCGCAGCAGCCGGCCGTGGCGCTCGACGACACGGCAGAGC
ACCATCTGCAGGCGTACTTTGCGGCGCGGCATGCGCAAACCCGCGCCACATCGGCCAACCGGCGCCTGACGGTGCTGCGG
CGCTACTTTCATTGGGCGCTGCGCGAGCGGCGCATCAGCGCCGATCCGACCGCGCGCCTGGCGGCCGCGCGCGTGCCGCT
GCGCGTGCCCAAGACCATGACCGAGACCCAGGTCGAGGCCCTGTTGCAGGCCCCCGATCCGGGCACGCCGCTGGGCCTGC
GCGACCGCGCGATGCTGGAACTGATGTATGCCAGCGGCCTGCGGGTGACCGAACTGGTGGGGTTGAAAACCTTCCATCTG
GCGCTCGATGAAAACCTGCTGCGCGTCACCGGCAAGGGCGGCAAGGAGCGCCTGCTGCCGTTTGGTGTCGAGGCCGGCCA
ATGGCTGGAGCGCTACCTGCAACAGGCGCGCGGCGTGATCCTGGGCGGCCAGCGCACGGACGACCTGTTCGTGACCCGGC
GCGGCTGCGGCATGACGCGCGTCATGTTCTGGATCATCGTCAAGCAATGGGCCCGGGTGGCGGGCATCACGGTCCCGCTG
TCGCCGCATACGCTGCGCCATGCGTTTGCCACCCACCTGCTCAACCATGGCGCCGATCTGCGCGTGGTACAACTGTTGCT
AGGTCATGCCGACATCTCAACCACCACCATCTACACCCATGTGGCACGCCAGCGGCTCAAGCAACTGCATGATGAGCACC
ATCCGCGCAGCCGTGCACCGGCCGGTAAATGA

Protein sequence : 
MPDPDAIDAFLDALWLEDGLARNTLAAYRSDLTRYAQWLHAQQPAVALDDTAEHHLQAYFAARHAQTRATSANRRLTVLR
RYFHWALRERRISADPTARLAAARVPLRVPKTMTETQVEALLQAPDPGTPLGLRDRAMLELMYASGLRVTELVGLKTFHL
ALDENLLRVTGKGGKERLLPFGVEAGQWLERYLQQARGVILGGQRTDDLFVTRRGCGMTRVMFWIIVKQWARVAGITVPL
SPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTTIYTHVARQRLKQLHDEHHPRSRAPAGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-52 47
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-52 47