Gene Information

Name : Veis_1116 (Veis_1116)
Accession : YP_995908.1
Strain : Verminephrobacter eiseniae EF01-2
Genome accession: NC_008786
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 1238755 - 1240167 bp
Length : 1413 bp
Strand : +
Note : KEGG: rfr:Rfer_0553 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase

DNA sequence :
ATGAGCGTTGAACGGCCCGGCGCCTGGACGCGCTTCATGGCCGAAGCGCGCGCGCGCATGGCCGAGGGCGTGCCGCTGGA
GAGCAGCGGCACGCTCACGCGGCTGACGGGCCTGGTGCTGGAAGCGGTGGGCCTGCGCGTGCCGGTGGGCGCGCAATGCA
TGGTCGGCATGCCCGGGCAGGCGCCGGTTTTGGCCGAGGTGGTGGGCTTTTCCGGCGAGCGCACATTCTTGATGCCGGCG
GGCGATACCCACGGGCTGTGCAGCGGCGCCCGCGTGCTGCCTTGCGCGCCGGATATGCCCGGACCCGTCTGGGGCGAACC
GTCCCGGCCGATACGGCGCACCGGCGTGCTCCGGCTGCCCATGGGCAATGGCCTGCTCGGGCGCGTGGTCGATGCCCAGG
GCCTGCCGCTGGACCATCGCGGGCCGGTGCAGGACACGGTCTTGGCGCCGATGGCGCGCGACCGGATCAACGCGATGGAG
CGCGATCCGGTGCGCCAGCCGCTGGACACGGGCGTGCGCGCGATCAACGCCTTGCTCACGGTCGGGCGCGGGCAGCGCCT
GGGGTTGCTGGCTGGCTCGGGGGTGGGCAAGAGCGTGCTGCTGGGCATGATGGCCCGCTACACGGGCGCCGACGTGATCG
TGGTCGGGCTGATTGGCGAGCGCGGCCGCGAGGTCAAGGAATTCGTCGAAGACATTCTGGGCGCAGACGGCCGCGCGCGC
TCGGTGGTGGTGGCCGCGCCCGCCGATGCGCCGCCGCTGTTGCGCATGCAGGGGGCCTCGTATGCCACGGCGGTGGCCGA
GCATTTTCGGGACCAGGGCCGGCATGTGCTGCTGCTGCTGGACTCGCTGACCCGCTACGCGATGGCCCAGCGCGAAATTG
CGCTGGCCATTGGCGAGCCGCCGGCGACCAAGGGCTATCCGCCATCGTGCTTTGCCCGGCTGCCGCAACTGGTCGAGCGC
AGCGGCAACGGCCTGCAGGGGCAAGGCTCGATCACCGCCTTCCATACCGTGCTGACCGAAGGGGACGACCCGCATGACCC
GGTGGCCGATGCGGCGCGGGCCATTCTCGACGGGCATATCGTGCTGTCGCGGGCGCTGGCCGAGGCCGGGCATTTCCCGG
CCATCGATATCGAGCAGTCGAGCTCGCGCGTGATGCACCGCCTGGTGCCGGATCGGCATTTGGAACTGGCCCGGCGCTTT
CGCGCGCTGTACTCGCGCTACCAGAAGGGGCGCGATCTGTTGCAGGTCGGCGCATACGCCAGCGGCTCGGACCCGGCGCT
GGACGAAGCCATCCGCTTGCAGCCGCAGATGGCGCAATTTCTGCAACAAGACCTGCACCAGGCCGCCACGCTGGAGCAGA
GCGTGGCCGCGCTGGCGGCAGCGCTGGACCCTTGCAGGCCCGGCGATGTCTGA

Protein sequence :
MSVERPGAWTRFMAEARARMAEGVPLESSGTLTRLTGLVLEAVGLRVPVGAQCMVGMPGQAPVLAEVVGFSGERTFLMPA
GDTHGLCSGARVLPCAPDMPGPVWGEPSRPIRRTGVLRLPMGNGLLGRVVDAQGLPLDHRGPVQDTVLAPMARDRINAME
RDPVRQPLDTGVRAINALLTVGRGQRLGLLAGSGVGKSVLLGMMARYTGADVIVVGLIGERGREVKEFVEDILGADGRAR
SVVVAAPADAPPLLRMQGASYATAVAEHFRDQGRHVLLLLDSLTRYAMAQREIALAIGEPPATKGYPPSCFARLPQLVER
SGNGLQGQGSITAFHTVLTEGDDPHDPVADAARAILDGHIVLSRALAEAGHFPAIDIEQSSSRVMHRLVPDRHLELARRF
RALYSRYQKGRDLLQVGAYASGSDPALDEAIRLQPQMAQFLQQDLHQAATLEQSVAALAAALDPCRPGDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 8e-71 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-71 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-71 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-71 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-71 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-71 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-63 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-63 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-68 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-70 45
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-70 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-68 45
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-70 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-61 44
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-62 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 5e-61 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-61 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-62 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-56 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-58 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-58 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-60 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-58 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 7e-64 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-60 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 6e-62 42
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-64 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 8e-62 42
escN CAI43874.1 EscN protein Virulence LEE Protein 4e-65 42
escN AAC38383.1 EscN Virulence LEE Protein 2e-65 42
escN YP_003223475.1 translocator EscN Virulence LEE Protein 6e-65 42
escN AAC31513.1 L0034 Virulence LEE Protein 9e-66 42
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 9e-66 42
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-65 42
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-65 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-60 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-60 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-60 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 7e-61 41
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 6e-65 41
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-65 41
escN AAK26715.1 EscN Virulence LEE Protein 5e-65 41
escN AAL57542.1 EscN Virulence LEE Protein 5e-65 41
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG2499 Protein 6e-123 64
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG2331 Protein 5e-114 61
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG1254 Protein 2e-109 59
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-78 46
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG0192 Protein 6e-75 46
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG0515 Protein 4e-62 44
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG0390 Protein 1e-69 43
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG2144 Protein 3e-77 43
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG0730 Protein 9e-66 42
Veis_1116 YP_995908.1 flagellar protein export ATPase FliI VFG0812 Protein 5e-66 42