Gene Information

Name : hemC (Veis_1040)
Accession : YP_995834.1
Strain : Verminephrobacter eiseniae EF01-2
Genome accession: NC_008786
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1155234 - 1156271 bp
Length : 1038 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
TTGAGCCGCACGCGCCCCTCTCCGATCGTCATCGCCACGCGCGCCAGCCGCCTGGCCCTCTGGCAGGCCGGGCATGTGCA
AGCCCTGCTCCAGGCCCGGGGCCACAGCGTGCAACTGCTGGGCATGACGACCCGGGGCGACCAGATTCTGGACCGCTCGC
TGTCCAAGGTGGGCGGCAAGGGGCTGTTCGTCAAAGAACTGGAAGCGGCGCTCGCCGAAGGCCGCGCCGACATCGCCGTG
CATTCGCTCAAGGACATGCCGATGGAACTGCCCGCCGGCTTTGCGCTGGCCTGCGTGCTCGAACGCGAAGACCCGCGCGA
TGCCTGGGTCTCGCCGCAATACGCCACGCTCGAAGCCCTGCCCCCGGGCGCCGTCGTCGGCACCTCCAGCCTGCGCCGCC
AGGCGCTGCTGCAAGCCCTGCGGCCCGACCTGCGCATGGAGCCGCTGCGCGGCAACCTCGACACGCGCCTGCGCAAGCTC
GACGCAGGCCAGTACCAGGCCATCGTGCTCGCGGTCGCCGGCCTCAAACGCCTGGGGCTCGAAGCACGCATCCGCGCCCC
GTTCGCGCCCGCCGCGCTGCTGCCCGCCGCCGGCCAGGGCGCATTGGGCATCGAAGTGCGCAGCGAGCGCCAAGACCTGT
GCGCCGCGCTGGCCGCGCTGGCACACCAGCCGAGCTGGCTGGCCGTGGCTGCCGAGCGTGCCGTGAGCCGGGCCATGGGC
GGCAGTTGCTCCATGCCGCTGGCGGCATATGGCCAGTTCCATGGCGCCGTGCTGCAGCTCGATGCCGCCTGGGGCGACCC
GCAGGGACAAGCCCCCCTGGTGCGCGCGCAAGCGAGCGCCACCGTCACCACGCTGGCGCAGGCCGAGGCCCTGGGCAGCG
CGCTGGCCCGGCGCCTGTGTGCGGACGGTGCCCGGCCCCTGGTTCCGGTGCACGATCCGGCCCACGGTCTGGTGCACGAT
CCAGTCCACGATTTGGCCCATGACCTGGGCCACGACCTGGGCCATACCCCGGCCGATGGCCTGAGCCATCGCCGCTGA

Protein sequence :
MSRTRPSPIVIATRASRLALWQAGHVQALLQARGHSVQLLGMTTRGDQILDRSLSKVGGKGLFVKELEAALAEGRADIAV
HSLKDMPMELPAGFALACVLEREDPRDAWVSPQYATLEALPPGAVVGTSSLRRQALLQALRPDLRMEPLRGNLDTRLRKL
DAGQYQAIVLAVAGLKRLGLEARIRAPFAPAALLPAAGQGALGIEVRSERQDLCAALAALAHQPSWLAVAAERAVSRAMG
GSCSMPLAAYGQFHGAVLQLDAAWGDPQGQAPLVRAQASATVTTLAQAEALGSALARRLCADGARPLVPVHDPAHGLVHD
PVHDLAHDLGHDLGHTPADGLSHRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-51 51
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-51 51