Gene Information

Name : kdsB (BMASAVP1_A0571)
Accession : YP_991919.1
Strain :
Genome accession: NC_008785
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 581498 - 582289 bp
Length : 792 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
ATGACCTCCCCGCTCCCTTTCGTCGCCGTCGTCCCCGCCCGCCTCGCGTCGACCCGCCTGCCGAACAAGCCGCTCGCCGA
TCTCGGCGGCAAGCCGATGGTCGTGCGCGTCGCCGAGCGCGCGCGTGAAGCCGGCGCGCAGCAGGTGCTCGTCGCATCCG
ACGCGCAGCGCGTGCTCGACGCGGTACGCGAGCACGGCTTCGACGCGGTGCTCACGCGCGCCGACCATCCGTCCGGCACC
GATCGCCTCGCCGAGGTCGCCGCGAAGCTCGGCTTCGACGACGACACGATCGTCGTCAACGTCCAGGGCGACGAGCCGCT
GATCGATCCGCAGCTCGTGCGCGACGTAGCGTCGCACCTCGCCGCGCACCCGTCGTGCGCGATCGCGACGGCCGCGCACC
CGATTCACGAAGCGCACGAGGTGTTCAATCCGAACTACGTGAAGGTCGTGCTCGACGCGCACGGCGTCGCGCTGTACTTC
TCGCGCGCGCCGATTCCGTGGTCGCGCGATGCTTACCTGCCGCACTGGCCGAACGTCGCGGCGATGCCCGCGCCGACGTG
CCCGGTCTATCGGCACATCGGCCTGTACGCGTATCGCGCACGCTTCCTGCGCACGTATCCGACGCTCGCGCAGGCGCCGA
TCGAGGCGGCCGAACAGCTCGAGCAGTTGCGCGCGATGTGGCATGGCGAGCGGATCGCGGTGCGCGTCACCGAGCATGCG
CCCGAGGCCGGCATCGACACGCCGGCCGATCTCGAACGCGTGCAGGCCCTTTTTCGGTCTCGCGCCAAATAA

Protein sequence : 
MTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGAQQVLVASDAQRVLDAVREHGFDAVLTRADHPSGT
DRLAEVAAKLGFDDDTIVVNVQGDEPLIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYF
SRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHA
PEAGIDTPADLERVQALFRSRAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-32 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-31 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-32 44