Name : BMASAVP1_A0453 (BMASAVP1_A0453) Accession : YP_991802.1 Strain : Genome accession: NC_008785 Putative virulence/resistance : Virulence Product : type II/IV secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 445211 - 446434 bp Length : 1224 bp Strand : + Note : identified by match to protein family HMM PF00437 DNA sequence : GTGCGGTCCGCAGCATCCGCGCTGCCCCGGCCGCGCGCGCCCGAGCTCGCCGACGACGCACCCGCGGTCGGTATCGTCGC CGACATGCTGCGCGCGGCCCACGAGCGCGATGCTTCCGACATCCATGTCGAGCCCTGTGAATCCGGCTGGCGCGTGCGTC TGCGCATCGACGGCGTGCTGCACGAGTTCGCGCGGCCGCCCGCTCATTTGCGCGACGCATGCGTGACGCGCATCAAGGTA CTCGCGCGGATGGACATCGCCGAGCGCCGCGTGCCGCAGGACGGCCGGCTGCGGCTCCCGCTCGCGCCGGGGCGCGCGGG CGACTACCGCGTGAGCTCGCTGCCGACGCTGCATGGCGAGAAACTCGTGCTGCGGCGTCTGGAGACGCTGCCCGCCGATC TGTCGCTCGCCGCGCTCGGCTTCGACGCGGCTCAGGCACGCGGCGTCGAGGCGGCGATCGGCGCGCCGCACGGTCTCATC CTCGTCACGGGGCCGACGGGCAGCGGCAAGACGCTGTCACTGTATTGCTTCCTGCAAATGCTGAACGACGTGTCGCGCAA CGTCTGCACGGTCGAGGATCCGGCCGAGATCGAGCTCGACGGCATCAACCAGGTCGGCGTGCGCGAGAAGGCGGGCCTCA CCTTCGCGGTCGCGCTGCGCGCGTTCCTGCGGCAGGATCCCGACGTCATCATGGTCGGCGAGATACGCGATGCGCAGACC GCCGACGTCGCGCTGAAAGCCGCGCAGACCGGGCACCTCGTGCTGTCGACGCTGCACACGAATGACGCGCCCGCCGCGGT AGCCCGCCTGCTCGACATCGGCGTCGCGCCGTACAACCTCGCCGCCGCGCTGCGGCTCGTGACAGCGCAGCGGCTCGTGC GACGCCTGTGCCCCGCTTGCCGCGCGCCGTCGGACGCGTCGCCCGCCACACTGCGCGCCGCGGGATTCGACGCCGCGTCG ATCGACGCCGGCTGGCGCCCGTATGCCGCGAACGGATGCGCCGCATGCCATGGAATCGGTTATCGGGGGCGCATCGGCAT CCATCAGGTGATGCCGCTGTCCGCCGAGTTGCGCAACCTGACCGTCGCGCGCGCGGGCAGCGCCGAACTCGCGCGACAAG CGCGCGCCGAAGGCATGGCGAGCCTGCGCGATGCGGCACTCGCCCGCGTTCGCGACGGCACGACGAGCTTGAGCGAAGCG CTCGCCACGACGGAGGCGGCATGA Protein sequence : MRSAASALPRPRAPELADDAPAVGIVADMLRAAHERDASDIHVEPCESGWRVRLRIDGVLHEFARPPAHLRDACVTRIKV LARMDIAERRVPQDGRLRLPLAPGRAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAAQARGVEAAIGAPHGLI LVTGPTGSGKTLSLYCFLQMLNDVSRNVCTVEDPAEIELDGINQVGVREKAGLTFAVALRAFLRQDPDVIMVGEIRDAQT ADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAALRLVTAQRLVRRLCPACRAPSDASPATLRAAGFDAAS IDAGWRPYAANGCAACHGIGYRGRIGIHQVMPLSAELRNLTVARAGSAELARQARAEGMASLRDAALARVRDGTTSLSEA LATTEAA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-73 | 49 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-73 | 49 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
BMASAVP1_A0453 | YP_991802.1 | type II/IV secretion system protein | VFG2426 | Protein | 2e-172 | 100 |
BMASAVP1_A0453 | YP_991802.1 | type II/IV secretion system protein | VFG0233 | Protein | 1e-89 | 50 |
BMASAVP1_A0453 | YP_991802.1 | type II/IV secretion system protein | VFG2048 | Protein | 9e-74 | 49 |
BMASAVP1_A0453 | YP_991802.1 | type II/IV secretion system protein | VFG0182 | Protein | 8e-71 | 48 |
BMASAVP1_A0453 | YP_991802.1 | type II/IV secretion system protein | VFG1876 | Protein | 2e-67 | 44 |