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Name : prpR (BMASAVP1_0880) Accession : YP_990480.1 Strain : Genome accession: NC_008784 Putative virulence/resistance : Unknown Product : propionate catabolism operon regulatory protein Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 888311 - 890395 bp Length : 2085 bp Strand : + Note : identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF06506; match to protein family HMM PF07728; match to protein family HMM TIGR02329 DNA sequence : ATGAGCACCCTACCCGAAACCGGCGTGCGGCCGCGCGTCTGGGCGGTCGGCATCAGCCGGCTGCGCGCGCTCTTTCGCGA CATCGCCGACGAATACGAAGAACGCGCCGATCTGCGGATCGTCGCGCGCGGCTACGAGGAGGCGATCACGGCGCTCGCGA CGGCGGGCGCCGAGCGCCCCGACGCGATCGTCGCCGCCGGCTCGAACGGCACCTATCTGAAGGCGCGCGTGCGCGTGCCC GTCGTGCTCGTCAATCCGACCGGCTTCGACGTGATGCACGCGCTCGCGCGGGCGCGGCGCGATGCGGGCCGGATCGCGCT CGTCAGCTACGGCGAGACGCCGCCCGAGGTGCGCAGTTTCGCGGCCGCGTACGGGCTCGACGTCGTGTTCGCGTCGTACC AGAGCGCGCAGGAGGCGGACACGCGCGTGCTCGAGATGCGCGAGCGCGGCATCGAGACCGTCGTCGGGCCGGGGCTCGTC ACCGATCTCGCGGCGAACGCCGGGATGGGCGCGGTGTTCGTCTATTCGCACGCGTCGGTGCGCGCCGCCGTGAACACCGC GCTCGAGGTCGCGCACGCGACGCACGCGGAAGCGCTGCGCCGCGAGCGCCTCGACAACCTGCTGCAGCACCTGCGCGACG GCGTGGTGGCGCTCGACCGCGAGGGCCGCATCGAGGCGATCAACGAGCGGCTCGCGCTCGCGCTCGGCGTATCGCCGTCG GCCGCGGTGGGCCGCGCGCTGGACGATCTGACGCCCGAGCTGCGCACGCTGCGCGCGGCCGACGGCGACACGCTCGCGAC GGTGCGCGGCGTGCGCTACGTCGTGCATCGCGGGCCGCTCGCCGCGAGCGGCGGCGCGCCCGGCAGCGTGCTGACGTTCC AAGAATCGCGTGCGGTCGAGCGGCTCGACCGCACGCTGCGCTCGCATCAGCACGCGCAGCAGTTCACCGCGCGCTACCGG CTCGACGACATCGTCGGCACGACGCCCGCGATCGCGTACGCGCGCGACCTCGCGCGGCGCTACGCGAAATCGGACGCGAC CGTGCTGATCCTCGGCGAGAGCGGCACCGGCAAGGAGATGATCGCGCAGAGCCTGCACGCGCTGTCCGCACGCCGCAAGT ATCCGTTCGTCGCGGTCAACTGCGGCGCGTTTCCGGAATCGCTGCTCGAGAGCGAGCTGTTCGGCTACGAGGAAGGCGCG TTCACCGGCGCGCGGCGCGGCGGCAAGGCGGGGCTGTTCGAGGCCGCGCACCGCGGCACGCTGTTTCTCGACGAGATCGG CGAAATGCCCCCGTCGCTGCAAAGCCGGCTGCTGCGCGTGCTGCAGGAGCGCGAGGTCGTGCGCGTCGGCTCGACCGAGC CGGTTCCGGTCGACATCCGCGTCGTCGCCGCGACGCACCGGCCGCTCTTCGCCGCCGTCGAGGCGGGCACGTTCCGCGCG GATCTCTATTACCGGCTGAACATCCTGAACATCGGGCTGCCGCCGCTGCGCGAGCGCGCGGCCGACATTCCGGCGCTCGC CGCGACGCTGCTCGCGCAGGCCGCGCGCCGCGAGCCGCGGCTCGCCGAGCGGCTGCGCGACGCCAACGATGCGGCGCGCG CGCTCGACGCGGCGAACGCCGCGCTCGCCCGCTATCGATGGCCGGGCAACGTGCGCGAATTGCAGAACGTGATCGAGCGC ATCGCCGTCGAGCTCGCCGACGCGGGCGAGCGCGGCGATGCGGCCGTGAGCGCCGACACGCTGCGCGCGATCGCGCCCGA GGTGTTCGCGCTCGATACGCTCGGCGGGTTCGGCTCGTTCGGCTCGGCGGCGGGCGGCGGGCACGGCGACGCGAGCGGCG GAGATATCGATGCCGATGCCGACGCGCGACGCCCGACGCTCGTGCAGCGCCGCCGGCGCGCGGAAGCCGACGAGATTCGC GCGGCGCTCGACGCATGCGGCGGCGACCGCGACCGCGCGTGCGCGAGGCTCGGCATCAGCAAGACAACGCTGTGGCGCAA GCTCGCGGCGAGCGAAGGGAAAGCGCGAGGCAATAAGCGCGGCGGCGGCCACGGCGGCGACAACGACGAAGGCGCGGGTG CGTGA Protein sequence : MSTLPETGVRPRVWAVGISRLRALFRDIADEYEERADLRIVARGYEEAITALATAGAERPDAIVAAGSNGTYLKARVRVP VVLVNPTGFDVMHALARARRDAGRIALVSYGETPPEVRSFAAAYGLDVVFASYQSAQEADTRVLEMRERGIETVVGPGLV TDLAANAGMGAVFVYSHASVRAAVNTALEVAHATHAEALRRERLDNLLQHLRDGVVALDREGRIEAINERLALALGVSPS AAVGRALDDLTPELRTLRAADGDTLATVRGVRYVVHRGPLAASGGAPGSVLTFQESRAVERLDRTLRSHQHAQQFTARYR LDDIVGTTPAIAYARDLARRYAKSDATVLILGESGTGKEMIAQSLHALSARRKYPFVAVNCGAFPESLLESELFGYEEGA FTGARRGGKAGLFEAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVVRVGSTEPVPVDIRVVAATHRPLFAAVEAGTFRA DLYYRLNILNIGLPPLRERAADIPALAATLLAQAARREPRLAERLRDANDAARALDAANAALARYRWPGNVRELQNVIER IAVELADAGERGDAAVSADTLRAIAPEVFALDTLGGFGSFGSAAGGGHGDASGGDIDADADARRPTLVQRRRRAEADEIR AALDACGGDRDRACARLGISKTTLWRKLAASEGKARGNKRGGGHGGDNDEGAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 1e-83 | 42 |
