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Name : BMASAVP1_1006 (BMASAVP1_1006) Accession : YP_990605.1 Strain : Genome accession: NC_008784 Putative virulence/resistance : Virulence Product : sigma-54 interaction domain/Fis family transcriptional regulator domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1014228 - 1015196 bp Length : 969 bp Strand : + Note : identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728 DNA sequence : ATGTCGCAACACAGCAGTGACGGCAGACGGCTGCACGGCAATTCGTGTCTGATCCAGGCGCTGTTGCACAAGATCGAAAA AGTGGCCGCGACTCGTGCAAGCGTGTTGATCGTCGGCGAAAGCGGGGTCGGCAAAGATATCGTCGCAAGACTCCTCCATG ACATGAGCCCACGCCGCCGTGGCCCGTTCGTTCCGGTCAATTGCGGCGCGATTCCGGCCGACATCGCCGAATCGCAGTTG TTCGGCCACGAGAAGGGCAGCTTCACCGGCGCGGCCGCGCAGCACATCGGCTTCTTCGAGGCCGCGCGCGGCGGCACGAT CTTCCTCGACGAAGTGGCCGAGATGTCGCGCGATCTGCAGGTGAAGCTGCTGCGCGCGCTCGAATCGAACACCATCACGC GCGTGGGCGGCAGCGAGCCGATCGCGCTCGACGTGCGCGTGGTCGCGGCCACTCACCACAACCCTGCCGAGGCGGTGCAG GAAGGGCGCTTTCGCGAAGACCTGTTCTACCGGCTCGCCGTGTTCGCGCTGCGCGTGCCGGCGCTCAGGCATCGCGAGGA CGATATCGAGGGCATCGCGCAGGAGCTCGTCGATACGCTCAACAGCCGGCACAGCACGCGCAAGCGGCTCTCGGGGCAGG CGCTGAAGACGCTGCGCACCTATTCGTGGCCGGGCAACGTGCGCGAGCTGCGCAATGCGATCGAGCGCGCGTACATCCTC TCCGACGAGCAAATCGAGCAGTTGCCGGTGCGACGGCTCGCGCCGCGCGACGACGTGCGCCGGAACGCGATGACGCTGCC GCTCGGCATGACGCTCGCGCATTCGCAGCAGCGCTTCATCGCCGCGTCGCTCAAGTACTTCGACGGCGACAAGCCGCGCA CCGCGAAGGCGCTCGGCATCAGCCTGAAGACGCTGTACAACCGGCTCGCGCTGATGCGCGAGCACGACGGGGAAACCGCG CAGCACTAA Protein sequence : MSQHSSDGRRLHGNSCLIQALLHKIEKVAATRASVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQL FGHEKGSFTGAAAQHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHHNPAEAVQ EGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKRLSGQALKTLRTYSWPGNVRELRNAIERAYIL SDEQIEQLPVRRLAPRDDVRRNAMTLPLGMTLAHSQQRFIAASLKYFDGDKPRTAKALGISLKTLYNRLALMREHDGETA QH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 6e-41 | 41 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 4e-41 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BMASAVP1_1006 | YP_990605.1 | sigma-54 interaction domain/Fis family transcriptional regulator domain-containing protein | VFG1214 | Protein | 1e-57 | 43 |
