Gene Information

Name : BARBAKC583_0435 (BARBAKC583_0435)
Accession : YP_988753.1
Strain : Bartonella bacilliformis KC583
Genome accession: NC_008783
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 438476 - 439162 bp
Length : 687 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAAAATACTCATCATTGAAGATGATCGTGAAACAGGGCGTTATCTCGAAAAAGCATTTTTAGAAGCGGGGCATGCAGC
TGATATTGCTTGTGATGGGGATACAGGTTATGCTTTGGCCGAGACAGAACGTTATGATGTTATGATTATTGATAGGATGT
TGCCGCATCGTGATGGTCTTTCTATCATTTCTGAGTTACGTGCAAAAGGGAATGAAACTCCTGTCCTTATTCTTTCTGCT
TTAGGGCAAGTTGATGACCGTGTGATGGGGTTGCGTGCAGGAGGCGATGATTATCTGACAAAACCTTATGCTTTTTCGGA
ATTACTTGCACGCGTGGAAGTATTACAACGGCGAAAAAATCCTAAAGAGGCAGAAACTGTTTATTGTGTTGGCGATCTTG
AGCTTGATCGGTTATCACACACTGTGAAACGTGGTGAAATGAATATCACATTGCAACCACGAGAATTTCGTTTGCTTGAA
TATTTAATGCGTCATGCTGGTCAGGTTGTGACACGCACGATGCTTTTGGAAAATGTTTGGGATTATCATTTTGATCCTCA
AACAAATGTTATTGATGTTCATATTTCCCGTTTAAGAGCAAAAATAGAGAAAGATTTTGATATTCCGCTTTTGCATACGG
TACGTGGGGCTGGATATATGCTGAAAGCTCCAGACAAAAAAACATGA

Protein sequence : 
MKILIIEDDRETGRYLEKAFLEAGHAADIACDGDTGYALAETERYDVMIIDRMLPHRDGLSIISELRAKGNETPVLILSA
LGQVDDRVMGLRAGGDDYLTKPYAFSELLARVEVLQRRKNPKEAETVYCVGDLELDRLSHTVKRGEMNITLQPREFRLLE
YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRAKIEKDFDIPLLHTVRGAGYMLKAPDKKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-40 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator BAC0347 Protein 2e-49 51
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator BAC0111 Protein 9e-55 49
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator BAC0083 Protein 2e-48 49
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator BAC0125 Protein 3e-47 48
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator BAC0308 Protein 6e-48 47
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator BAC0197 Protein 6e-44 47
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator BAC0638 Protein 5e-41 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator VFG0596 Protein 2e-40 43
BARBAKC583_0435 YP_988753.1 DNA-binding response regulator VFG1389 Protein 8e-35 42