Gene Information

Name : nrdE (BARBAKC583_0356)
Accession : YP_988675.1
Strain : Bartonella bacilliformis KC583
Genome accession: NC_008783
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 350022 - 352172 bp
Length : 2151 bp
Strand : +
Note : Catalyzes the rate-limiting step in dNTP synthesis

DNA sequence :
TTGGAAACAGTAAGTACGAAAGGGCTGCAAAGGCCAGATCAAATCACAGACTATCATGCGCTGAATGCGATGCTTAATCT
TTATGATGAAAATGGTCATATTCAATTTGATATGGATCGACGTGCTGCACGGCAGTATTTTCTCCAGCATGTTAATCAAA
ATACGGTTTTTTTCCATAATCTAAAGGAGAAAATAAATTACCTGATAGAGGAAGGGTATTATGAGAAGGCGTTATTTGAG
CTTTATGATTTTTCTTTTATCAAAAGGCTTTTTAAACGCGCTTACGCATTTAAGTTTCGTTTTCCTACTTTTTTAGGTGC
ATTTAAATATTATACAAGTTACACGCTAAAGACTTTTGATGGAACTCGCTATCTTGAGCGTTATGAGGATCGTGTTTGTC
TTGTCGCTTTATACTTAGCACAAGGAAATAAAGATTTTGCCGAGAGCTGCGTAGATGAAATTATGACAGGACGGTTTCAA
CCTGCAACACCAACATTTTTAAATGCAGGAAAAAAGCAACGAGGCGAATTGGTGTCATGTTTTTTATTGCGGGTTGAAGA
CAATATGGAATCGATTGGTCGTTCAGTTAATTCAGCTTTGCAACTTTCAAAGCGTGGAGGGGGAGTAGCACTTTGTCTAA
CTAATTTGCGGGAAGCAGGGGCGCCAATCAAACAAATAGAAAATCAGTCATCGGGTGTTTTACCCGTAATGAAATTGTTA
GAAGATTCATTTTCTTATGCTAATCAGCTTGGTGCACGGCAGGGGGCTGGTGCTGTTTATCTGCATGCTCATCATTTAGA
TATTATGAAATTTTTGGATACAAAGCGTGAAAATGCTGATGAAAAAGTAAGAATCAAAACTCTTTCGCTTGGTGTCGTTA
TTCCTGATATTACTTTTGAACTTGCACGTAATAATGAGGATATGTATCTATTTTCACCTTATGATATCGAGCGTGTTGTA
GGAAAACCTTTTAGCGATATTTCTTTGACAGAGCATTATCGGTCTTTTGTTGATAATCCAAAAATCCGTAAAAAGAAAAT
AAGTGCTCGTGTCTTTTTCCAGACATTAGCAGAAATTCAATTTGAATCAGGTTATCCGTATATTTTGTTTGAAGATACAG
CTAATCGCGCTAATCCTGTAGCAGGACGCATTAATATGAGCAATTTATGTTCAGAAATTTTGCAAATAAATGAAGCAAGT
GAATTAGAAACAGATTTGGGTTATCGTACTGTTGGAAGCGATATTTCCTGTAATCTTGGGTCAATGAATATTGCAAAAGC
AATGGATAGTAGTGATTTTGGTCGCACTGTGGAAACAGCTGTTCGTGCTCTTACGGCTGTTTCTGATATGAGTAATATTG
CTTGTGTGCCTTCTATTGCAAAAGGGAATGCTGAAAGTCATGCGATTGGCTTGGGGCAAATGAATTTGCATGGTTTTTTA
GCGCGTGAAAAGATCTATTATGGCTCGCCAGAGGCGATTGATTTCACCAATATCTATTTTTATACAGTAACATATCATGC
ATTGCGCGCTTCTAATTTGATTGCACGCGAACGTCAGGAAAAGTTTGCAGGATTTGAAAAGTCAGCTTACGCAGATGGCT
GTTTTTTTGAAAAATATATTAAGAGAGAGTGGAAGCCACAATTTTTGCTTGTACAAGAGATTTTTGCGCGTAATAATATA
CTTATTCCAACTCAAGGGGATTGGAAGAAACTTAAGGAATTGATTGCCAAATATGGGCTTTATAATCGCAATCTTCAGGC
TGTACCGCCTACAGGGTCGATTTCCTATATCAATCACGCAACTTCTTCTATCCATCCCATTGCCTCAAAAATTGAAATTC
GCAAAGAGGGTAAAATTGGACGTGTTTATTATCCTGCTCCTTATATGGATAATACAAATTTAAATTTTTACCAGGATGCT
TATGAGATTGGTCCTGAAAAAATTATCGATACTTATGCAGCAGCTACACAGCATGTTGATCAAGGTCTTTCATTAACTTT
GTTTTTTCCTGATACGGCGACGACGCGTGATATTAATCGTGCACAAATTTATGCATGGAAAAAGGGCATAAAGAGTATTT
ATTATATACGGCTGCGGCAAAAGGCGTTAAGTGGAACAGAAGTTGAAGGCTGTGTTTCGTGCAGCTTATAG

Protein sequence :
METVSTKGLQRPDQITDYHALNAMLNLYDENGHIQFDMDRRAARQYFLQHVNQNTVFFHNLKEKINYLIEEGYYEKALFE
LYDFSFIKRLFKRAYAFKFRFPTFLGAFKYYTSYTLKTFDGTRYLERYEDRVCLVALYLAQGNKDFAESCVDEIMTGRFQ
PATPTFLNAGKKQRGELVSCFLLRVEDNMESIGRSVNSALQLSKRGGGVALCLTNLREAGAPIKQIENQSSGVLPVMKLL
EDSFSYANQLGARQGAGAVYLHAHHLDIMKFLDTKRENADEKVRIKTLSLGVVIPDITFELARNNEDMYLFSPYDIERVV
GKPFSDISLTEHYRSFVDNPKIRKKKISARVFFQTLAEIQFESGYPYILFEDTANRANPVAGRINMSNLCSEILQINEAS
ELETDLGYRTVGSDISCNLGSMNIAKAMDSSDFGRTVETAVRALTAVSDMSNIACVPSIAKGNAESHAIGLGQMNLHGFL
AREKIYYGSPEAIDFTNIYFYTVTYHALRASNLIARERQEKFAGFEKSAYADGCFFEKYIKREWKPQFLLVQEIFARNNI
LIPTQGDWKKLKELIAKYGLYNRNLQAVPPTGSISYINHATSSIHPIASKIEIRKEGKIGRVYYPAPYMDNTNLNFYQDA
YEIGPEKIIDTYAAATQHVDQGLSLTLFFPDTATTRDINRAQIYAWKKGIKSIYYIRLRQKALSGTEVEGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 75