Gene Information

Name : BARBAKC583_0273 (BARBAKC583_0273)
Accession : YP_988597.1
Strain : Bartonella bacilliformis KC583
Genome accession: NC_008783
Putative virulence/resistance : Resistance
Product : resolvase/recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 263748 - 264389 bp
Length : 642 bp
Strand : -
Note : identified by match to protein family HMM PF00239

DNA sequence : 
ATGGCATTACTCGGCTACGCGAGGGTTTCAACCAACCAGCAAAAATTAACGCTTCAGATTGCTGCCCTCAAAAAGGTTGG
TGTACGAGAAGACCGTATTTTTTCTGATATTATGTCAGGATCAACAGATAAACGTGAAGGGTTACAGCGTTTGTTGGGGC
GAGCAGAAAAAGGCGATGTTATTGTTTGTACAAAAATGGATCGATTAGGACGGAATACCTCTGATATGATCCATATTATT
GACGATTGTTACAAGAAAGGAATTGTCGTTCGTTTTTTAGAAAACGGTCTCAGCACGGAAGGAACAGCAGGGAAAATGGT
TATTCAGATTCTTGCTGCTGTAGCAGAAGCTGAGCGTGCACGTATTTTAGAACGCACGAATGAAGGTCGCGATGCTGCAA
TGGATAAGGGTATAAAATTCGGACGGAAGCCTCATCCAAAAGCAGAATTGGCATTGGAGCTCATTAAACAAGGTTTCTCA
TCTACAATTGTCAAACAAAAAACAGGGATTTCTCTTTCTACTCATTTTCGATTGAAGAGGCAGCTCCGTTCAAAAAAGAC
AGCTCAACCTGGTAAAAATGAAGATCATTTAAACAATGAATACCAAACAGATATTGAGAATTTCACAAACAAAACATCAT
AA

Protein sequence : 
MALLGYARVSTNQQKLTLQIAALKKVGVREDRIFSDIMSGSTDKREGLQRLLGRAEKGDVIVCTKMDRLGRNTSDMIHII
DDCYKKGIVVRFLENGLSTEGTAGKMVIQILAAVAEAERARILERTNEGRDAAMDKGIKFGRKPHPKAELALELIKQGFS
STIVKQKTGISLSTHFRLKRQLRSKKTAQPGKNEDHLNNEYQTDIENFTNKTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 2e-39 52
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 2e-39 52
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 2e-39 52
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 1e-38 52
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 7e-33 50
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 5e-33 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BARBAKC583_0273 YP_988597.1 resolvase/recombinase GU371926.1.gene95.p0 Protein 2e-38 52