|
Name : Ajs_0988 (Ajs_0988) Accession : YP_985303.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1028604 - 1029515 bp Length : 912 bp Strand : + Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: pol:Bpro_3191 tyrosine recombinase XerD DNA sequence : ATGGTTTTCGCCATGTTGCCCGACAGCCAGAACGCCATAGACCCCTTCATCGACGCCCTTTGGCTGGAGGACGGCCTGTC GCGCAACACGCTGGCCGCCTACCGCCGGGACCTCACGCTGTATGCCCAATGGCTGGCGCAGCAGAACCCTCCGCTGGCGC TGGATGCCACGGCCGAGCACCACCTGCAGGGCTACTTCGCTGCCCGCCACGCGCAGACGCGCGCCACGTCGGCCAACCGC CGCCTCACCGTGCTGCGGCGCTACTTCCACTGGGCATTGCGCGAGCGACGCATCGCAGCCGACCCCACAGTGCGCCTGCA AGCCGCGCGCCAGCCGCTGCGCGTGCCCAAGACGCTGACGCAGGCGCAGGTGGAGGCCCTGCTGCATGCGCCGGACGATG CCACGCCGCTGGGCCTGCGCGATCGCACCATGTTGGAGCTGATGTACGCGAGCGGCCTGCGCGTGAGCGAGCTGGTCACG CTGAAGACCTTCCACCTGGGGCTGGCCGAAGGCGTGCTGCGCGTCATGGGCAAGGGCGGCAAGGAGCGGCTGGTGCCCTT TGGCGAAGAGGCGCACCGCTGGCTGCAGCGCTACCTGGCCGAGGGGCGTGGCGCCATCCTGGGCGGGCAACAAACGGATG ACCTGTTCGTCACGCAGCGCGGCGCGGCCATGTCGCGCGTGATGTTCTGGGTCATCGTCAAGAAATGCGCGCAGGCTGCG GGCATTACCGCGCCGCTGTCGCCCCACACGCTGCGCCATGCCTTTGCCACGCACCTGTTGAACCACGGTGCGGACCTGCG CGTGGTGCAACTGCTGCTGGGCCACGCCGACATTTCCACCACCACCATCTACACCCACGTGGCGCGCGAGCGGCTGAAGG CGCTGCATGCGCAGCACCATCCGCGCGGTTGA Protein sequence : MVFAMLPDSQNAIDPFIDALWLEDGLSRNTLAAYRRDLTLYAQWLAQQNPPLALDATAEHHLQGYFAARHAQTRATSANR RLTVLRRYFHWALRERRIAADPTVRLQAARQPLRVPKTLTQAQVEALLHAPDDATPLGLRDRTMLELMYASGLRVSELVT LKTFHLGLAEGVLRVMGKGGKERLVPFGEEAHRWLQRYLAEGRGAILGGQQTDDLFVTQRGAAMSRVMFWVIVKKCAQAA GITAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTTIYTHVARERLKALHAQHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 6e-55 | 54 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 6e-55 | 54 |
