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Name : Ajs_0805 (Ajs_0805) Accession : YP_985125.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 847635 - 849368 bp Length : 1734 bp Strand : - Note : KEGG: rfr:Rfer_2902 type II secretion system protein E; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase DNA sequence : ATGGCTGCTATCGACACACAGAAAGAAGCTCAACCCATTGCCCTACCCGGACTGGCGCGCGCGTTGATGTCTGTGGGCAA ATTGGATCAAAAAGCGGCGGAAGAGATTTACAAAAAGTCACAAAATAGCCGCAGTAGCTTTATTGCAGAGCTCACGGAAT CGAAAATCATCACGCCAAGTGATCTGGCCCATACGGTATCAACCGTATTTGGTGCCCCCTTGCTAGATGTCGATGCGATC GACCGGCAGCGCATCCCCAAAGATCTGTTGGACGTCAAACTGTGCCAGTCCTACAAAGTCATCGCTCTCAGTAAGCGCAA TAACCGGCTCATCGTCGCCACCGCGGATCCGACATTTCAAGAGGCCGCAGAAAAGATCAAGTTCACCACACAAATGGGGG TGGACTGGATCATCGCGGAATATGACAAGCTGCTCCGCTTGATTGAGGCGAGCACGAAGAGCGGTACAGAAACGCTCGAC GGCATCAACAGCAGTAATGATTTTGAGTTCGGCGATATTCCCGTTGATGAAGCTCCGGACGAGGACGCTGACAATTCCGC GGAAGTCGAGGATGCTCCCGTTGTCAAATTTCTGCACAAGATGCTGTTGGATGCTTTCAATATGCGCGCATCCGATTTGC ATTTTGAGCCCTACGAGCACCATTACCGTGTCCGCTTCCGCATAGATGGCGAATTGCGCGAAATCGCATCGCCGCCTATT GCCATCAAGGAGAAGCTGGCCTCGCGCATCAAGGTGATCTCCCGCCTGGATATTTCGGAAAAACGCGTGCCCCAGGATGG CCGCATGAAGCTCAAGGTTGGGCCGGACCGGGTTATCGATTTCCGCGTCAGCACACTGCCTACGCTCTTTGGCGAGAAGA TCGTGATCCGTATTCTCGATCCGAGCAGCGCCAAGCTGGGTATTGACGCACTGGGATATGAGCCCGAGGAAAAGGAGCGT TTACTGCAGGCCATCAACCGCCCTTATGGAATGATCCTGGTGACCGGACCCACGGGCTCCGGGAAGACCGTGTCGCTCTA CACATGTCTCAATTTGTTGAACAAGCCCGGCGTCAATATTGCGACCGCTGAGGACCCCTCGGAAATCAATCTCCCGGGCG TGAACCAAGTCAACGTCAATGAGAAAGCCGGCCTCACGTTTGCCGTCGCGCTCAAGTCATTCCTTCGCCAAGATCCGGAC ATCATCATGGTGGGTGAAATCCGGGATCTGGAAACGGCAGACATTTCAATCAAAGCCGCGCAGACGGGTCACTTGGTGCT CTCTACCCTGCACACCAATGACGCTCCCACGACATTGACGCGCATGCGCAATATGGGCATCGCGCCCTTCAATATCGCAT CCAGCGTGATTCTTATTACGGCGCAGCGACTGGCGCGTCGCTTGTGCCCCAATTGCAAGGCGCCCGTGGACATTCCGCAT GAGACGCTGCTGGAGGCCGGCTACCGGGACGAGGAGATCGACGGCTCATGGGTTACCTACCGACCGGTGGGCTGCTCCGC CTGCAATAACGGATACAAGGGGCGCGTGGGCATTTATCAAGTCATGCCGGTGTCCGAAGAAATCCAGCGCATCATCCTGC GCGATGGAAGCGCACTGGAAATCGCCGAACAGGCACGCCTGGAAGGCGTCCGTTCTCTGCGTGAATCCGGGCTTCACAAG GCAAAAATGGGATTGACCTCGTTGGAAGAGGTCTTGGCTGTCACCAACGAATAA Protein sequence : MAAIDTQKEAQPIALPGLARALMSVGKLDQKAAEEIYKKSQNSRSSFIAELTESKIITPSDLAHTVSTVFGAPLLDVDAI DRQRIPKDLLDVKLCQSYKVIALSKRNNRLIVATADPTFQEAAEKIKFTTQMGVDWIIAEYDKLLRLIEASTKSGTETLD GINSSNDFEFGDIPVDEAPDEDADNSAEVEDAPVVKFLHKMLLDAFNMRASDLHFEPYEHHYRVRFRIDGELREIASPPI AIKEKLASRIKVISRLDISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVIRILDPSSAKLGIDALGYEPEEKER LLQAINRPYGMILVTGPTGSGKTVSLYTCLNLLNKPGVNIATAEDPSEINLPGVNQVNVNEKAGLTFAVALKSFLRQDPD IIMVGEIRDLETADISIKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCPNCKAPVDIPH ETLLEAGYRDEEIDGSWVTYRPVGCSACNNGYKGRVGIYQVMPVSEEIQRIILRDGSALEIAEQARLEGVRSLRESGLHK AKMGLTSLEEVLAVTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-80 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-80 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ajs_0805 | YP_985125.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 6e-135 | 53 |
| Ajs_0805 | YP_985125.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 2e-144 | 53 |
| Ajs_0805 | YP_985125.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 7e-134 | 49 |
| Ajs_0805 | YP_985125.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 9e-82 | 43 |
| Ajs_0805 | YP_985125.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 3e-80 | 42 |
