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Name : Ajs_0666 (Ajs_0666) Accession : YP_984987.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 702069 - 703457 bp Length : 1389 bp Strand : - Note : KEGG: pol:Bpro_1330 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGCGCCACCCCCTGCCCTACGCATTTGCGCGCAGCAGCCAGCTGCTGCTGGAAGACGACGGCCAGCAGCTCGTGCTGTG GCACGGCCCGCAGCCGGACGCCGGCGCGCTGTCCGAAGTGCTGCGCAAGCATGCCGTGCACCAGTTCATGCCGCTGGACG CCCCCACGCTGGCGCAGCGCATCAGCGCGGCGTATTCGCAAAGCGAATCCAGCGCGGCCACGGTGGTGAGCGAGGTGGAG GAAGGCGCCGACCTCTCGCGCATGATGCAGGAGCTGCCCGCGGTGGAAGACCTGCTGGAGTCCGCGGGCGACGCGCCCAT CATCCGCATGCTCAACGCCCTGCTCACGCAGGCCGTGCGCGACGGCGCGAGCGACATCCACATCGAGCCCTACGAACGCC ATTCCAGCGTGCGCTTTCGCGTGGACGGCACGCTGCGCGAGGTGGTGCAGCCCAACCGCGCGCTGCACGCCGCGCTGATC AGCCGCCTGAAGATCATGGCGGACCTGGACATCTCCGAAAAGCGCCTGCCGCAGGACGGACGCATCAGCCTGCGCCTGGG CACCCGCGCCGTCGACGTGCGCGTATCCACGCTGCCCAACGCCCATGGCGAGCGCGCCGTGCTGCGCCTCTTGGACAAGA GCGAGAGCAAGCTGAACCTGGAGGCCGTGGGCATGCAGGGCGAGGTGCTGGCGCGGCTCGCGCACCTGATCCAGCAGCCG CACGGCATCATCCTCGTGACCGGCCCCACGGGCTCGGGCAAGACCACCACGCTGTACGCGGCGCTGGCGCGGCTGGACGC CGCGCGCAGCAACATCATGACGGTGGAAGACCCCATCGAGTACGAGTTGCCCGGTGTGGGCCAGACGCAGGTCAATGCCA AGATCGACCTGACGTTTGCCAAGGCCCTGCGCGCCATCCTGCGCCAGGACCCCGATGTGATCATGATCGGCGAGATCCGC GACTTCGAGACCGCGCAGATCGCCATCCAGGCCTCGCTCACCGGCCACCTGGTGCTGGCCACGCTGCACACCAACGACGC GGCCAGCGCCATCACGCGCCTGACCGACATGGGAGTGGAGCCGTTCCTGCTGTCCTCGTCGCTGCTGGGGGTGCTGGCGC AGCGCCTGGTGCGCAAATATTGCGGCGAGTGCCACGGTGCAGGCTGCGAGCACTGCGGCCATACCGGCTACGCGGGGCGC ACCGGCGTGTTCGAACTGCTGGTGGTGGACGACGCCATCCGCGCACAGATCCACAACCAGGCCCCAGAGGCCGAGGTGCG CACCCAGGCCCTGGCCGGCGGCATGACGCTGATGCGCGACGATGGCGAGCGGCTGATCCACGCCGGCATCACCAGCCGCG AAGAAGTGCTGCGTGTGACGCGCGACTGA Protein sequence : MRHPLPYAFARSSQLLLEDDGQQLVLWHGPQPDAGALSEVLRKHAVHQFMPLDAPTLAQRISAAYSQSESSAATVVSEVE EGADLSRMMQELPAVEDLLESAGDAPIIRMLNALLTQAVRDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALHAALI SRLKIMADLDISEKRLPQDGRISLRLGTRAVDVRVSTLPNAHGERAVLRLLDKSESKLNLEAVGMQGEVLARLAHLIQQP HGIILVTGPTGSGKTTTLYAALARLDAARSNIMTVEDPIEYELPGVGQTQVNAKIDLTFAKALRAILRQDPDVIMIGEIR DFETAQIAIQASLTGHLVLATLHTNDAASAITRLTDMGVEPFLLSSSLLGVLAQRLVRKYCGECHGAGCEHCGHTGYAGR TGVFELLVVDDAIRAQIHNQAPEAEVRTQALAGGMTLMRDDGERLIHAGITSREEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-91 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-91 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ajs_0666 | YP_984987.1 | general secretory pathway protein E | VFG0182 | Protein | 8e-99 | 58 |
| Ajs_0666 | YP_984987.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-94 | 50 |
| Ajs_0666 | YP_984987.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-91 | 50 |
| Ajs_0666 | YP_984987.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-55 | 44 |
| Ajs_0666 | YP_984987.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-63 | 44 |
