Gene Information

Name : Ajs_3956 (Ajs_3956)
Accession : YP_988138.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 4210775 - 4212211 bp
Length : 1437 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGCAGATCCGCCGCGCCACCAAGATCGTTGCCACCCTGGGCCCCGCCTCCAGCGACCCGCAACTGCTGGAGCAGATGAT
CGCGGCGGGCGTGAACGTGGTGCGCCTGAACTTCAGCCACGGCAAGGCGCAGGACCATGTGGAGCGCGCCGCCATGGTGC
GCGAGGCCGCCCAGCGCGCCGGGCGCGAGGTCGCCATCATGGCCGACCTGCAGGGGCCGAAGATTCGCGTGGGCAAGTTT
GCCGAAGGACGGGTGATGCTGGAGCCGGGCCAGCCTTTCGTGCTGGACGCGTCGCGCAGCGAGCCCGGCGACCTGCAGGG
CGTGGGCCTGGACTACAAGGAACTTCCCCGCGACGTGAAGCCCGGCGACGTGCTGCTGCTGAACGACGGCCTCATCGTGC
TGCAGGTGGATGCCGTGCGCGGCGAGGCGGTGTACACCACCGTGAAGATCGGCGGCGAGCTGTCCAACAACAAGGGCATC
AACAAGCAGGGGGGAGGCCTCACGGCGCCCGCCCTCACGGCCAAGGACATGGAGGACATCAAGACCGCCATGAGCTTCCA
GGCCGACTATGTGGCCGTGAGCTTCCCCAAGAACGCCACCGACATGGAGATGGCGCGCCAGCTGTGCAACGTTGCCGCGG
CCGAGTTCCGCCACAAGCCCGGCCTGATCGCGAAGATCGAGCGTGCAGAGGCCGTGCCGCTGCTGGAGGAGATCCTGCGC
GTGTCCGACGGCATCATGGTGGCGCGCGGCGACCTGGCCGTGGAGGTGGGCAACGCCGCGGTGCCCGCGCTGCAGAAAAA
GATGATCCGCATGGCGCGCGACATGAACAAGGTGGTGATCACCGCGACCCAGATGATGGAGAGCATGATCGCCAACCCCG
TGCCCACGCGCGCCGAAGTGAGCGACGTGGCCAACGCCGTGCTGGACGGCACCGACGCCGTGATGCTCAGCGCCGAGACG
GCGGCCGGCAAGTACCCGCTGGACACGGTGCGGGAGATGGCCGCTATCTGCGCCGCCGCGGAAGCGGCCGAAGACCTGGA
GCGCGACTCCGACTTCATCGGCCAGACCCTGGGCCGCATCGACCAGTCCATCGCCATGGGTGCGCTGTTCACGGCGCACC
ACCTGGGTGCCAAGGCCATCGTGGCGATGACCGACAGCGGTTCCACGGCACTGTGGATGAGCCGCCACCGCATCCACATT
CCCATCTATGCATTGACGCCGAAGGTGGCCACGCAGCGGCGCATGGCGATGTTCCGCAACGTGTGCCCGTTGCTCATGGA
CACCAGCGCCGACCGCGACACTGCACTGGACCAGGCCGAGAGCCACCTGAAGATGCGCAACATCGTGCAACAGGGCGACC
TGTACGTGATCACCTGCGGCGAGCCCATGGGTGCGCCCGGCGGCACGAACATGCTCAAGATCTGCCGCGCACGATGA

Protein sequence :
MQIRRATKIVATLGPASSDPQLLEQMIAAGVNVVRLNFSHGKAQDHVERAAMVREAAQRAGREVAIMADLQGPKIRVGKF
AEGRVMLEPGQPFVLDASRSEPGDLQGVGLDYKELPRDVKPGDVLLLNDGLIVLQVDAVRGEAVYTTVKIGGELSNNKGI
NKQGGGLTAPALTAKDMEDIKTAMSFQADYVAVSFPKNATDMEMARQLCNVAAAEFRHKPGLIAKIERAEAVPLLEEILR
VSDGIMVARGDLAVEVGNAAVPALQKKMIRMARDMNKVVITATQMMESMIANPVPTRAEVSDVANAVLDGTDAVMLSAET
AAGKYPLDTVREMAAICAAAEAAEDLERDSDFIGQTLGRIDQSIAMGALFTAHHLGAKAIVAMTDSGSTALWMSRHRIHI
PIYALTPKVATQRRMAMFRNVCPLLMDTSADRDTALDQAESHLKMRNIVQQGDLYVITCGEPMGAPGGTNMLKICRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 9e-109 56
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-58 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-58 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-58 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_3956 YP_988138.1 pyruvate kinase VFG0479 Protein 1e-58 41