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Name : fliP (Ajs_3797) Accession : YP_987980.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 4032942 - 4033697 bp Length : 756 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCATAAGGCCGTGCGCGGCATCGCGGCCGGTGCGGCTGGCCTGCTGCTGGCGGGCGCCGCCTGGGCGCAGCAGCAGCC CGCGGGCGCGCTGCCGCTGGTGATCGGCTCGGGGCCGGGCGGCACGAGCTACTCGGTGCCCATCCAGACGCTGCTGTTCT TCACGGCGCTGTCGTTCCTGCCGGCCGTGCTGCTCATGATGACGGGCTTCACGCGCATCGTGATCGTGCTGTCGCTGCTG CGCCAGGCCATCGGCACGCAGTCCGCGCCGCCCAACCAGGTCATCATCGGCCTGTCACTGTTCCTCACGCTGTTCGTCAT GGGGCCCACGTTGGACAAGGTGTACCAGGAGGCCTACGTGCCCTACACCACCAACGCCATCACCTTCGAGCAGGCCATCC AGAAGGCCGAGGCGCCCATGCGCGGCTTCATGCTCAAGCAGACGCGCCAGTCCGACTTCGCGCTGTTCGCACGCCTGGCC AAGCTGGACGAGGGCGTGACGGCCGAGACCGCGCCGCTGCGCGTGCTGGTGCCGGCCTTCGTGACCAGCGAGCTGAAGTC GGCCTTCCAGATCGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACATGGTGGTCTCCAGCGTGCTCATGTCGCTGG GCATGATGATGCTGTCGCCGGTGCTGGTGGCGCTGCCGTTCAAGCTCATGCTGTTCGTGCTGGCCGATGGCTGGAACCTG CTCATCGGCTCGCTGGCCGCGAGCTTCGCGACGTGA Protein sequence : MHKAVRGIAAGAAGLLLAGAAWAQQQPAGALPLVIGSGPGGTSYSVPIQTLLFFTALSFLPAVLLMMTGFTRIVIVLSLL RQAIGTQSAPPNQVIIGLSLFLTLFVMGPTLDKVYQEAYVPYTTNAITFEQAIQKAEAPMRGFMLKQTRQSDFALFARLA KLDEGVTAETAPLRVLVPAFVTSELKSAFQIGFMIFIPFLIIDMVVSSVLMSLGMMMLSPVLVALPFKLMLFVLADGWNL LIGSLAASFAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 6e-25 | 42 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 6e-25 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 5e-25 | 42 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-25 | 41 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 3e-24 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_987980.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-62 | 67 |
| fliP | YP_987980.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 3e-61 | 66 |
| fliP | YP_987980.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 2e-57 | 62 |
| fliP | YP_987980.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 5e-49 | 55 |
| fliP | YP_987980.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 3e-25 | 42 |
