|
Name : murD (Ajs_3672) Accession : YP_987859.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : 6.3.2.9 Position : 3885470 - 3886966 bp Length : 1497 bp Strand : - Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : GTGCTGGTGCTGGGTCTGGGCGCCTCGGGCCTGGCCATGGCGCGCTGGTGTGTGCGCTGTGGTGCGCAGGTCACCGTGGC CGACACGCGCAGCAGTCCGCCGCAGCTGGCGGTGCTGCGCGCAGAACTGCCGCAGGTGGAGTTCATCGCCGGCGCCTTCG ATGAGACCCTGGTGCAGGGGCGCGCGCTGCACGCGGTATACCGTTCGCCAGGTCTGAGTCCGAATGAGATTGCTCCTGTT GTTATAGCTGCTCGCGCCCGCCAGATAAGCGTGGAAGGCGAATTGGGTTTGTATGCGCAGGCGCTGCGCGAGCTGCGCGC CGGTCAGGGCTACGCGCCCGCGGTGCTGGCCATCACTGGCACCAATGGCAAAACCACCGTGACCTCGCTCACGGGGCTGC TGGTGGAGTGCGCGGACAAGCGCGTGGCGGTGGCCGGCAACATCGGCCCCACGCTGCTGGATACGCTGGCGCAGCACATC GACGCGGGCACGCTGCCCGAGGTGTGGGTGCTGGAGCTGTCGAGCTTTCAGCTCGATGGCGTGCAGGGCTTCGAGCCCAC AGCCGCGGCCGTGCTCAACATCACGCAGGACCACCTGGACTGGCACGGCAGCCTGCAGGCCTACGCACAGGCCAAGGGGC GCATCTTCGGCGAAACCGGCCTCATGGTGCTCAACCGCGAGGACGCGGAAGTCATGGCCCTGCTGCCACCGCCAGTGCGC GTGAAGCTGCAAAAGCCCCAGTTGCGCGCACACGTGACCTTCGGTGGCGACATGCCGCAGCGCCCGGGGGACTTCGGCAT CGAGGTGGTCAGCGGCATGGCCTGGCTGGTGCGTGCACACGAAGCGGACGAAACGGCCAAGCGCGGCAAGGCGCAGGACG CCGAGCTGCACATCCAGCGCCTGATGCCCGCCGACGCGCTGCGCATCCGCGGGCGGCACAACGCCATCAATGCCCTGGCT GCGCTGGCGCTGGCCCAGGCTGCGGGCTGCCCGCTCGCGCCCATGCTCTACGGCCTGCGCGAATACCGCGGCGAGCCGCA CCGCGTGGAGTCCGTGGGCATCGTGCGCGAGGTGGAGTACTTCGACGACAGCAAGGGCACCAACGTGGGCGCCACGGTGG CTGCGCTGACCGGGCTGGGCGCCGACCGGCGCCTGGTGGTGATCCTGGGTGGCGACGGCAAGGGTCAGGACTTCTCGCCG CTGGCCGCGCCCGTGGCGCGCTATGCGCGCGCGGTGGTGTTGATCGGGCGCGACGCGCCGCAGATCCGCGCCGCGCTGCA GGGCTGCGGCGTGCCGCTGCAGGACGCCGCCACGCTGCCCGAGGCCGTGCAGTTGGCCACACAGCGCGCCCATGCGGGCG ACGCCGTGCTGCTGTCGCCCGCCTGCGCCAGCCTGGACATGTTCGACAACTACGCGCACCGCGCTCGCGTTTTCTGCGAA GCCGTGCAGGCGCTGGCCGAAGACGCCGGCCAGACGCTGGAAGGAGGGACGGCATGA Protein sequence : MLVLGLGASGLAMARWCVRCGAQVTVADTRSSPPQLAVLRAELPQVEFIAGAFDETLVQGRALHAVYRSPGLSPNEIAPV VIAARARQISVEGELGLYAQALRELRAGQGYAPAVLAITGTNGKTTVTSLTGLLVECADKRVAVAGNIGPTLLDTLAQHI DAGTLPEVWVLELSSFQLDGVQGFEPTAAAVLNITQDHLDWHGSLQAYAQAKGRIFGETGLMVLNREDAEVMALLPPPVR VKLQKPQLRAHVTFGGDMPQRPGDFGIEVVSGMAWLVRAHEADETAKRGKAQDAELHIQRLMPADALRIRGRHNAINALA ALALAQAAGCPLAPMLYGLREYRGEPHRVESVGIVREVEYFDDSKGTNVGATVAALTGLGADRRLVVILGGDGKGQDFSP LAAPVARYARAVVLIGRDAPQIRAALQGCGVPLQDAATLPEAVQLATQRAHAGDAVLLSPACASLDMFDNYAHRARVFCE AVQALAEDAGQTLEGGTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 5e-48 | 41 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 5e-48 | 41 |
