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Name : Ajs_3594 (Ajs_3594) Accession : YP_987782.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 3789670 - 3791214 bp Length : 1545 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: pol:Bpro_1938 integrase, catalytic region DNA sequence : ATGCCCACACCCAGGGTCACCATGAGCAAACTACGACACACACTGCAACTGCTGCACCGCGGGGCCTTGAGCACCCGTCA AATCGGTGCCGCCCTCGGCATCTCCAAATCCACTGTCAGCGAGATAGCCAGCTACGCGCGCGTGGCCGGCGTGGACTGGG CACTGGCCCAGAGCCTGAACGACGACGAACTCCAGGCCCGGCTCTACAAGCCACCCGTGGCGCGCGAGTCCCGGCACCTT GAACCCGACCACGCCCACATCCACCGCGAACTGCGCCGACCTGGCGTGACGCTGCAGTTGCTTTGGGAGGAATACCAGCA ACAGCACAGCGGGCAGGCGTACAAGTACAGCGCCTTCTGCGAGAAGTACAAGGCCTGGGCCCGGCGCCTGCAGCGCTCCA TGCGCCAGACCCACACGGGCGGTGACAAGCTCTTTGTGGACTACGCCGGCCAGACCGTTCCCGTGGTGGATGCCGACACT GGCGAGATACGCCAGGCCCAGGTCTTCGTGGCCGTGCTGGGCGCATCGAACTACACCTACGCCTGCGCCACCGCCAGCCA GAAGGCCACCGACTGGGTGGCCAGCATCATTAGCGCGCTGGAGTTCATCGGCGGCGTGCCCCGCCTGCTGGTGCCTGACC AGCCGCGCGCCCTCATGGCCCGACCCGACCGTTACGAGCCCACCGCGCACCGCCTGCTCGAAGAGCTCTGTGCGCACTAC AGCCTGGCCGTGATGCCCGCGCGCCCGGCCAAGCCACGCGACAAACCCAAGGTGGAGGTCGCTGTGCAGGTGGTCGAGCG CTGGATTCTGGCCAGGCTGCGCCACCAGACCTTCTTCAGCCTGGCCGAGCTCAACCGGGCGATTGCCGCCTTGCTGGTGG ACTTGAACCAGCGCGCGTTCAAGAAGCTGCCGGGCAACCGCACCAGCGCCTTCGCCGAACTCGACCGGCCAGCCCTGCGC CCCCTGCCGCCGGTGCGCATGCCCATCGCGCGCTTCAAACCCGCCCGCGTCAACATCGATTACCACGTCGAGCTCGATGG CCACTACTACTCGGTGCCCCACGCCCTGGTGGGTGAGCCGGTGGAGTTGCGCATCACGGCCGGCACGCTCGAAGTCCTGC ACGGCAGCAAACGCGTGGCCGCCCACGCCCTCAATCCCCGACGGGGTGCACACACCACCACGCCCGAGCACATGCCGGCC TCGCACCGGGCGCACCTGCAGTGGACGCCGGCCAAGCTCATCGCCTGGGGTGAGCGCGTGGGCGCGGCCGCCGCCGCCGT GGTGCGCTGGCAGATGGAGCACCGCCAGCATCCCGAGCAGGGTTACCGCTCCTGTCTGGGCCTCATGCGCCTGGGCCGTG AGTACGGGGCTGACCGGCTGGAGGCCGCCTGTGCGCGGGCGCAGTCGATTCGCTCACCGTCCTACAAGAGCATCGCCTCC ATCCTGGGCTGCGGCCTGGACCAGCGGCCGCTGGATGCGCCGATGGCCGCACAGGCGAGCCTGCCGCTGCACGAGAACGT GCGCGGGCCGGGCTACTACCACTGA Protein sequence : MPTPRVTMSKLRHTLQLLHRGALSTRQIGAALGISKSTVSEIASYARVAGVDWALAQSLNDDELQARLYKPPVARESRHL EPDHAHIHRELRRPGVTLQLLWEEYQQQHSGQAYKYSAFCEKYKAWARRLQRSMRQTHTGGDKLFVDYAGQTVPVVDADT GEIRQAQVFVAVLGASNYTYACATASQKATDWVASIISALEFIGGVPRLLVPDQPRALMARPDRYEPTAHRLLEELCAHY SLAVMPARPAKPRDKPKVEVAVQVVERWILARLRHQTFFSLAELNRAIAALLVDLNQRAFKKLPGNRTSAFAELDRPALR PLPPVRMPIARFKPARVNIDYHVELDGHYYSVPHALVGEPVELRITAGTLEVLHGSKRVAAHALNPRRGAHTTTPEHMPA SHRAHLQWTPAKLIAWGERVGAAAAAVVRWQMEHRQHPEQGYRSCLGLMRLGREYGADRLEAACARAQSIRSPSYKSIAS ILGCGLDQRPLDAPMAAQASLPLHENVRGPGYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 3e-99 | 46 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 1e-99 | 46 |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 2e-99 | 46 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 6e-97 | 44 |
