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Name : Ajs_3445 (Ajs_3445) Accession : YP_987635.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3638504 - 3639832 bp Length : 1329 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGACATCCTCCTCCTTCGCAAAGACCTCGCATCGGCCGTCGCACGGCTGGAAACCCGCAAGAAGCCCCAGGCCTT CCTGAATGTGGAGGCGTTCCAGGCCCTGGAGTCCGAGCGCAAGACCATCCAGATGCGCACCGAGGAGTTGCAGTCGCAGC GCAACCAGCTGTCCAAGCAGATCGGCATGCTCATGGGCAAGGGTGAGAAGGACGCCGCCGAGGCTGCGAAAGCCCAGGTG GCCGCGATCAAGGCGGAACTGGACGGTTCTGCCACCCGGCTGGATCAGATCCAGGGCGAACTGCAAACGATGCTGGCCGC CGTCCCGAATCTGCCGCACGAGAGCGTGCCCGTGGGCTCGGACGAGAGCGCCAATGTGGAGGTGCGCCGCTGGAGCCCCG ATGGCCAACAGCCGCGCAGCCTGGGCTTCACCCCCAAGGACCATGTGGACCTGGGCGAGCCGCTGGGCCTGGACTTCGAC ATGGGCGTGAAGCTCTCGGGATCGCGCTTCACGGTGATGAAGGGGGGCATCGCGCGCCTGCACCGGGCCCTGGCGCAGTT CATGCTGGATGTGCAGACCCAGGAGCACGGCTACACCGAGTGCTACGTGCCCTACGTCGTCAATGCGGACTCGCTCAAGG GCACGGGCCAATTGCCCAAGTTCGAGGGCGACCTCTTCGCGGCCCAGAAGGGCGGTCAGGATGCCGAGCCCGTACCCGAC AACGCGCAGCTGTACCTCATCCCCACGAGCGAGGTGCCCCTGACCAACTTCGTGCGCGACGAAGTCTTGGCCGAGGCCCA GCTGCCGCTCAAGCTCACGGCCCATACGCCCTGCTTTCGGTCGGAAGCCGGCAGCTACGGCCGGGACACGCGCGGCATGA TCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGATCGTGCATCCCGACAAGAGCTACGAGGCGCTGGAGGAAATG ACCCGCCATGCTGAGGCTGTGCTGCAGAAGCTGGGCCTGCCCTACCGCGTGATGAGCCTGTGTACGGGCGACATGGGCTT TGGCGCCGCCAAGACCTACGACCTGGAAGTGTGGCTGCCCGCCCAGAACACCTACCGTGAGATCAGTTCGGTGAGCAACT GCGAAGCCTTCCAGGCCCGCCGCCTGCAGGCGCGCTTCAAGAACGCGCAGGGCAAGAACGAGCTGGTGCACACCCTCAAC GGGTCTGGCCTGGCCGTGGGCCGCACGCTGGTGGCGGTGCTGGAGAATTACCAGAACGAGGACGGCAGCGTGACCATTCC TGAGGTGCTCCGCCCCTACATGGGCGGTCAAGCCACGCTGTCGGTCTGA Protein sequence : MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQMRTEELQSQRNQLSKQIGMLMGKGEKDAAEAAKAQV AAIKAELDGSATRLDQIQGELQTMLAAVPNLPHESVPVGSDESANVEVRRWSPDGQQPRSLGFTPKDHVDLGEPLGLDFD MGVKLSGSRFTVMKGGIARLHRALAQFMLDVQTQEHGYTECYVPYVVNADSLKGTGQLPKFEGDLFAAQKGGQDAEPVPD NAQLYLIPTSEVPLTNFVRDEVLAEAQLPLKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPDKSYEALEEM TRHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLN GSGLAVGRTLVAVLENYQNEDGSVTIPEVLRPYMGGQATLSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-98 | 53 |
