Gene Information

Name : Ajs_3420 (Ajs_3420)
Accession : YP_987613.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3612632 - 3613312 bp
Length : 681 bp
Strand : -
Note : KEGG: pol:Bpro_1015 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGTAATGGGCAAGTGGTGCTGCAGGCGCAAGGCCTGACCAAGCGCTTTACCGAGGGCCGGCTGGACGTCACCGTGCT
CAAGGGCGTGGACCTGGCAGTGCACGCCGGCGAGACGCTGGCCATCGTTGGGGCGTCGGGCTCGGGCAAGAGCACGCTGC
TGCATCTGCTGGGGGGGCTGGACGCGCCCAGCGCCGGCACCGTCACGCTCCAGGGGCAGGCGCTGCAGGCGCTATCGCCC
GCGCAACAGGGGCGCCTGCGCAATGCGCACCTGGGCTTCATCTACCAGTTCCACCACCTGTTGCCCGAGTTCAGCGCCCA
GGACAACGTGGCCATGCCGCTGCGCATCCGCCGCGAGCCGTACGCGCAGTGCATCGAGCGGGCGGTGCGCATGCTCCAGG
CCGTGGGCCTGGGCGAGCGTGTGCACCATCGCCCGGCGGAACTGTCGGGTGGCGAGCGCCAGCGCGTGGCCATTGCCCGG
GCGCTGGTCACGCAGCCGGCCTGCGTGCTGGCCGACGAGCCCACCGGCAACCTGGACCGCGCGACCGCCGATGCCGTGTT
CGCCCTCATGCTGCAGCTAGCGCGCGAGCAGGGCACTGCCTTCGTGATGGTCACGCACGATGAATCGCTGGCCGCGCGGT
GCGACCGCGTCGTGCGCTTGGTCTCCGGTGTTTTGAGCTAA

Protein sequence : 
MSNGQVVLQAQGLTKRFTEGRLDVTVLKGVDLAVHAGETLAIVGASGSGKSTLLHLLGGLDAPSAGTVTLQGQALQALSP
AQQGRLRNAHLGFIYQFHHLLPEFSAQDNVAMPLRIRREPYAQCIERAVRMLQAVGLGERVHHRPAELSGGERQRVAIAR
ALVTQPACVLADEPTGNLDRATADAVFALMLQLAREQGTAFVMVTHDESLAARCDRVVRLVSGVLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_3420 YP_987613.1 lipoprotein releasing system ATP-binding protein NC_008702.1.4606598. Protein 7e-35 47
Ajs_3420 YP_987613.1 lipoprotein releasing system ATP-binding protein NC_012469.1.7686878. Protein 2e-37 43