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Name : Ajs_3212 (Ajs_3212) Accession : YP_987411.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3396726 - 3398144 bp Length : 1419 bp Strand : - Note : KEGG: rfr:Rfer_2580 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase DNA sequence : ATGTCTGCCGTTGTGCCCACCCTTCCTGACGGTTATGCCGTCCCATCGCTGGATCGCGAGGTGGCCCAGTTGCGCGTTCC GCCCCATTCCATCGAGGCAGAGTCCAGCGTGCTGGGCGGCCTGTTGCTGGACAACATGGCGTGGGACCGCGTGGGTGACC TGCTGGTGGATGGCGATTTCTACCGCCACGAGCACCAGCAGATCTACGCCGCCATCGGCGCGCTGATCAACGCCAGCAAG CCTGCGGACGTGATCACGGTCTACGAGCATCTGCAGGGCATGGGCAAGGCCGAGGAGATCGGCGGGCTGGCCTATCTGAA CAGCCTGGCGCAGTACGTGCCCAGCGCCAGCAACATCCGCCGCTACGCAGAGATCGTGCGCGAGCGCGCCATCCTGCGCA AGCTGGTGACCGCCAGCGACGACATCGCCACCAACGCCTTCAATCCCCAGGGCCGGCCGGTGGAGCGCATCCTGGACGAG GCTGAGCAGAAGATCTTCGCCATCGGCGAAGAGGGCTCGCGGATGAAGCAGGGCTTCCAATCGCTCGATTCGCTCGTGAT CGACCTGCTGGACCGCGTACAGGAGATGGCCGACAACCCCATGGACGTGACCGGCGTGCCCACGGGCTTCGCCGACCTGG ACCGCATGACCAGCGGTCTGCAGGCAGGCGACCTGGTGGTGCTCGCGGCGCGCCCTTCCATGGGCAAGACCTCGTTCGCG GTGAACATTGCCGAGCATGTGGCGCTCAACGAGGGCCTGCCGGTGGCCATCTTCTCGATGGAAATGGGCGCCGCCCAACT GGCGGTGCGTATCGTGGGCTCGATCGGGCGCGTGAACCAGGGCAACCTGCGCACCGGCAAGCTCAGCGACGAGGAGTGGC CGCGCCTGACCGAAGCCATCGAACGGCTGCGCACCGTGAGCCTGCACATCGACGAGACGCCGGGCCTGACCCCATCCGAG CTGCGCGCCAACGCGCGCCGCCTGGCGCGCCAGTGCGGCAAGCTCGGCCTGATCGTGGTGGACTATCTGCAGCTCATGAG CGGCTCGGGCAGCAACAGCTCCGACAACCGCGCCACTGAGCTGGGCGAGATCTCGCGGGGCCTGAAGATGCTGGCCAAGG AGCTGCAGTGCCCGGTGATCGCGCTGTCGCAGCTCAACCGTTCGGTGGAGCAGCGCACCGACAAGCGTCCCATGATGAGT GACCTGCGCGAATCGGGCGCCATCGAACAGGACGCGGACATCATCATGTTCATCTACCGCGACGACTACTACAACAAGGA GTCCAAGGAGCCGAACATTGCCGAAGTCATCATCGGCAAGCAGCGTAACGGCCCCACGGGCACGGTGAAGCTGTTCTTCC AGAAGAACCAGACGCGCTTTGAGAACCTGGCGGTGGGCGCAGGTGACGATTACTATTAA Protein sequence : MSAVVPTLPDGYAVPSLDREVAQLRVPPHSIEAESSVLGGLLLDNMAWDRVGDLLVDGDFYRHEHQQIYAAIGALINASK PADVITVYEHLQGMGKAEEIGGLAYLNSLAQYVPSASNIRRYAEIVRERAILRKLVTASDDIATNAFNPQGRPVERILDE AEQKIFAIGEEGSRMKQGFQSLDSLVIDLLDRVQEMADNPMDVTGVPTGFADLDRMTSGLQAGDLVVLAARPSMGKTSFA VNIAEHVALNEGLPVAIFSMEMGAAQLAVRIVGSIGRVNQGNLRTGKLSDEEWPRLTEAIERLRTVSLHIDETPGLTPSE LRANARRLARQCGKLGLIVVDYLQLMSGSGSNSSDNRATELGEISRGLKMLAKELQCPVIALSQLNRSVEQRTDKRPMMS DLRESGAIEQDADIIMFIYRDDYYNKESKEPNIAEVIIGKQRNGPTGTVKLFFQKNQTRFENLAVGAGDDYY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-100 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 9e-84 | 46 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-83 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-83 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-84 | 45 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-82 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 7e-84 | 44 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 8e-82 | 44 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-69 | 42 |
