Gene Information

Name : Ajs_3190 (Ajs_3190)
Accession : YP_987389.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 3.5.4.26
Position : 3374521 - 3375621 bp
Length : 1101 bp
Strand : +
Note : KEGG: pol:Bpro_2883 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
TTGCCACACATCGACCAAGCGCTTGGGCTCGCTGCCCAGGCGCTTTTTCTTTCCAATCCCAACCCCCGCGTGGGATGCGT
CATCACCGACGTTAACGGCAACATGCTGGGCCAGGGCTTTACCCAGCGCGCAGGGGCATCCCATGCCGAGGTGATGGCTT
TGCGTGACGCAGCCGCGCGGGGATGCGACGTGCGCGGCGCCACCGCATACGTCACGCTGGAGCCGTGCGCACACCAGGGG
CGCACCGGCCCCTGTTGCGATGCGCTCATTCAGGCCGGCATTGCACACGTAGTGGCATCCATCGCCGACCCCAATCCGCT
GGTGGCGGGTCAAGGGTTCGCGCGGCTGAGGGCTGCGGGAGTGCAGGTGGAGGTGGGCCCCGGCGGTACGCAATCACGCG
AACTGAATATCGGCTTCTTCAGCCGCATGGTGCGCGGCATCCCCTGGGTGCGCATGAAGGCCGCGGCCTCGCTCGATGGC
GTGACCGCATTGGCCAATGGCACCAGCCAATGGATCACATCCCCGGCGGCCCGTGCCGACGGGCATGCCTGGCGTGCCCG
CGCCTGCGCCGTGTTGACAGGCGTCGGCACCGTGTTGGCGGATGATCCGCGCCTGGATGTGCGGGAGATCGCCACCCCAC
GCCAGCCGCATCTGGTGATTGTCGACAGCCTGCTGCAGACGCCTGCGAATGCCCGGCTTTTCGACGTTGCCGACCGGCGT
GTACTGATCTACACCGCCCGGCCAGATGCCGCTGGCGCCGCGGCGCTGCGGGCACGCGGCGCCACGATCATCGAACTGCC
CAATGACCAGGGCAAGGTGGATCTGCCCGCCCTGTTGCGCAACCTGGCCCGCGAAGGCGTGAATGAACTGCACCTGGAGG
CCGGTCACAAGCTCAACGGCTCCTTCCTGCGGGAAGGGCTCGTGGATGAATTGCTGCTCTATCTGGCCCCGATCATGCTA
GGCCAGGGAGCCCAGGGCCTGTCCAACTGGGGGCCGTTGCAGACGCTGGCCGACGGGATTCCGATGCAATTCCAAGCCGT
GCAGCAGGTGGGGCCCGATTTACGGGTGGTGGCCCGCATCGCGGGGCACGCGGACTTCTGA

Protein sequence :
MPHIDQALGLAAQALFLSNPNPRVGCVITDVNGNMLGQGFTQRAGASHAEVMALRDAAARGCDVRGATAYVTLEPCAHQG
RTGPCCDALIQAGIAHVVASIADPNPLVAGQGFARLRAAGVQVEVGPGGTQSRELNIGFFSRMVRGIPWVRMKAAASLDG
VTALANGTSQWITSPAARADGHAWRARACAVLTGVGTVLADDPRLDVREIATPRQPHLVIVDSLLQTPANARLFDVADRR
VLIYTARPDAAGAAALRARGATIIELPNDQGKVDLPALLRNLAREGVNELHLEAGHKLNGSFLREGLVDELLLYLAPIML
GQGAQGLSNWGPLQTLADGIPMQFQAVQQVGPDLRVVARIAGHADF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-51 41
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-51 41