Gene Information

Name : Ajs_3112 (Ajs_3112)
Accession : YP_987313.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3285965 - 3286642 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3214 ABC transporter related

DNA sequence : 
ATGAGCCCCCAACCCACGTCCCTGCTGCAGGTGCGCGGCCTTGCCAAGCGCTACGGCGGGCAGGCGGTGTTCGAAGGCGT
GGATCTGCAGGTGCAGCGCGGAGAGTTCGTCGCCATCGTTGGCGACTCGGGCGTGGGCAAGTCCACGCTGCTCAACTGCT
TGGCGGGGCTGGACCATTGGGATGCCGGTCAGGTGCTGCACGAGGGCGTAGATCTGGGGCAGTTGGACGACACGCAGCGC
GCTCTGTGGCGTCGCGCCCATGTGGGGTTCGTGTTCCAGGCCTTCCATGTGTTGCCGCATCTGGACGTGGCGCAGAACGT
GGGCCTGCCGCTGATGTTGCTCAACCGCCCAGATGCGCAGCGCGTGCAGCACATGCTGGCCGCCGTGGGCCTGGAAGGCC
TGGGCGAGCGGCTGCCGCAGGAACTCAGCGGGGGACAGCTGCAGCGCGTGGCCATTGCCCGCGCGCTGGTGCACCGCCCC
GCCCTGCTGCTGGCCGATGAGCCGACGGGCAACCTGGACCCCACCACGGCGGCGCTGGTCATGGATCTGCTCATCGCCCA
GACCCGCGAGCACGGCGCCGCATTGGTGCTGGTGACCCATTCGCAGGCCGCCGCGGCGCGGGCGAACCGGGCGCTGCGCC
TCACGGCACAGGGCATCCGCCCGGCAGGAACTGCTTAG

Protein sequence : 
MSPQPTSLLQVRGLAKRYGGQAVFEGVDLQVQRGEFVAIVGDSGVGKSTLLNCLAGLDHWDAGQVLHEGVDLGQLDDTQR
ALWRRAHVGFVFQAFHVLPHLDVAQNVGLPLMLLNRPDAQRVQHMLAAVGLEGLGERLPQELSGGQLQRVAIARALVHRP
ALLLADEPTGNLDPTTAALVMDLLIAQTREHGAALVLVTHSQAAAARANRALRLTAQGIRPAGTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_3112 YP_987313.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-30 51
Ajs_3112 YP_987313.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-38 43
Ajs_3112 YP_987313.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-33 43
Ajs_3112 YP_987313.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-29 41