Gene Information

Name : Ajs_3076 (Ajs_3076)
Accession : YP_987282.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : serine palmitoyltransferase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0156
EC number : 2.3.1.50
Position : 3245392 - 3246573 bp
Length : 1182 bp
Strand : +
Note : PFAM: aminotransferase, class V; aminotransferase, class I and II; aminotransferase class-III; KEGG: neu:NE1655 aminotransferase class-I

DNA sequence :
GTGAGTCTTCTCAACAAGTTCGGCGCGCAGCGCCAGCTCCAGGCGAGCTTGGACGCGATGGGTGGCGTGGCACCGATCGC
GACGCCGATGGACGAGATCCATTCAGCCACCTCAGCGACCATCGGGGGGCGCCGCATGGTGCTCGCGGGGACCAACAACT
ACCTCGGCCTGACCTACGACGCCGCCTGCCGCGCCGCCGCCATCGCGGCCATCGAGACCCAGGGCACCGGCTCCACCGGT
TCGCGCATGGCGAGCGGCAACTACGCCGGCCACCGCGCCCTCGAACGTGAACTGGCAGACGCCGTCGGCTGGCCGTCCTG
CATCGTTTTTTCCACCGGCTACCAGACCAACCTCGGCGTGATCTCCGCGCTGGCCGACACCGGCGACTACCTGCTGGTGG
ATGCCGACAGCCATGCCAGCATCCATGACGGCTGCCGTTTGAGCAATGCGACGACCATCCGCTTCCGGCACAACGACCCC
GAAAACCTCGACCGCCGCCTGGCGCGGCTGGGCGACGATGCGCATCGCGCGCTGATCGTGGTCGAAGGCGTCTACAGCAC
GCTGGGCGACCGCGCGCCGTTGCAGGAAATCGCCGAGATCAAACGGCGCTATGGCGCCTGGCTGCTGGTCGACGAAGCGC
ATTCCTTCGGCGTGTTCGGCGAACGCGGCCTCGGCCTGGCAGAGCAACTGGGCGTGCTCGACGACGTGGACTTCATCGTC
GGCACCTTCTCCAAGAGCCTGGGCGGCGTCGGCGGCTTCTGCATCGGCCGGCACGCGGAACTCGAATACGTTCGGATGGT
GAGCCGACCGTACATCTTCACGGCCTCGTCGTCGCCGCCCTCGATCGCGGCCACGCGCGAAGCGCTGCGCCAGATGCTGG
ATGGCCATGCGTTGCGCGAACGACTGTGGCGGCACGCCGAACGCCTCTACGCCGAAGCAACGAAGCTCGGCTACCGGCTG
GGCACCACGACGCCCGGCCCGGTCGTGGCCTTGGTCTTCACCGAACGCGCCGAAGCACAGGCCCTGTGGCAGTCGCTGCT
GGACAGCGGCATCTACACCAACCTCATGATCCCGCCGGCCACGCCCGCAGGCCTGAGCCTGGTGCGCATCAGCCTCAGCG
CGGCGCACAGCGACGACGACATCGGGCAGATCATCGCCGCGCTGGCCAGTGCGCGGCGTTGA

Protein sequence :
MSLLNKFGAQRQLQASLDAMGGVAPIATPMDEIHSATSATIGGRRMVLAGTNNYLGLTYDAACRAAAIAAIETQGTGSTG
SRMASGNYAGHRALERELADAVGWPSCIVFSTGYQTNLGVISALADTGDYLLVDADSHASIHDGCRLSNATTIRFRHNDP
ENLDRRLARLGDDAHRALIVVEGVYSTLGDRAPLQEIAEIKRRYGAWLLVDEAHSFGVFGERGLGLAEQLGVLDDVDFIV
GTFSKSLGGVGGFCIGRHAELEYVRMVSRPYIFTASSSPPSIAATREALRQMLDGHALRERLWRHAERLYAEATKLGYRL
GTTTPGPVVALVFTERAEAQALWQSLLDSGIYTNLMIPPATPAGLSLVRISLSAAHSDDDIGQIIAALASARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85251.1 hypothetical protein Not tested PAI V 536 Protein 1e-90 53