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Name : Ajs_3052 (Ajs_3052) Accession : YP_987259.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 3220651 - 3222165 bp Length : 1515 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: pol:Bpro_5321 ISPsy20, transposase IstA DNA sequence : ATGGCCATGATTGGCAAGGTCCTGCGGATGCACCACCGCGAGAACAAATCGGTGCGAGAGATCGCGAGGGCGACGAGCCT GTCGCGCAACACGGTGAGGAAGTACCTGCGCGTGCCGGTGGCGCAGCCACCGAAGTACGTGCGCCGAGCGGCCTCGACGA AGCTGACGCCGTTCGTCGAGATGGTGAAGATGGCGTTGTTGGCCGACGCGCGTCGCCCGAGGAAGGAGCGGCGAACCGCG CGAGCGCTGCTGCAGCAGATTGCGGCGGCCGGCTATGAAGGCGGCTACACCCAGCTGACCGACTTCATCCGCGCTTGGAG AGCGCAGCAAGGAGGTGTCGCAGTCGGCAAGGCATTCGTGCCGCTCGCCTTCGAGCTGGGCGAGGCGTTCCAGTTCGATT GGAGCGATGAGGCGCTGGTGATCGGCGGGATCTACCGCAAGCTGCAGGTTGCGCACATGAAACTGTGCGCGAGCCGCGCG TTCTTCCTTGTGGCGTATCCGGGCCAGGGGCACGAGATGCTGTTCGATGCCCACACCCGGTCCTTCGCGGCGCTGGGCGG GGTGGCGCGTCGCGGGATCTACGACAACATGCGCACGGCCGTGGACAAGGTCCACAAGGGCAAGGGCCGCACCGTCAACG CCCGCTTCTCGGTGATGTGCGCGCACTATCTGTACGACCCCGACTTCTGCAACGTCGCCTCGGGCTGGGAGAAGGGGGTG GTGGAGAAGAACGTGCAGGACAGCCGCCGGCGCATCTGGATCGACGCGCGTGAGCGGCGCTTCGCCAGCTTCGACGAGCT CAACGCCTGGCTGGGCGAGCGCTGCCGGGCGCTGTGGGAGGAGATCAGGCATCCCGAACACAAGCAGTTCAGCGTGGCTG AGGTGCTCGAGCACGAACGGGTGCAGTTGATGCCGATGCCCGCCGCCTTCGACGGCTACGTCGAGAAGGTGGCACGGGTG AGCAGCACCTGCCTGGTGTCGGTGGCGCGCAATCGCTACTCGGTGCCATGCGAGCTGGCCGGGCAGATGGTCAGTTCGCA CCTGTATCCGACGCGCGTAACGGTGGTGGCCGGCGACGTGGTCGTGGCCGAGCACGAGCGGCTCACGGACAAGGGCAAGA CGCTCTACGACTGGCAGCACTACATTCCGTTGGTGCAGAGGAAGCCGGGGGCGTTGCGCAATGGAGCGCCGTTCACGGAT CTGCCGGAATCATTGCAGCGGCTGCGCCGGGGGCTGTTGCGCGAGAGCGGCGGCGACCGCCTGATGGCGCGGGTTCTAGC CCTGGTGCCGACGGCGGGACTGGAGGCGGTGCTGGTGGCCGTGGAGTTGGCGTTGGACGGCGCGCCGCCGTCGGGGCGCG TGAGCGTCGAGCACGTCATCAACGTGCTGGCGCGTCTGAACGCTGCGCCGAGGCCGGCCAACGTGCAAACTTCGCTGCAG GTGCTGACGCCGCCGATCGCCGATACGGCTCGCTACGACCGGCTGCGCGACATCCAGGAGACCGGCCATGCGTGA Protein sequence : MAMIGKVLRMHHRENKSVREIARATSLSRNTVRKYLRVPVAQPPKYVRRAASTKLTPFVEMVKMALLADARRPRKERRTA RALLQQIAAAGYEGGYTQLTDFIRAWRAQQGGVAVGKAFVPLAFELGEAFQFDWSDEALVIGGIYRKLQVAHMKLCASRA FFLVAYPGQGHEMLFDAHTRSFAALGGVARRGIYDNMRTAVDKVHKGKGRTVNARFSVMCAHYLYDPDFCNVASGWEKGV VEKNVQDSRRRIWIDARERRFASFDELNAWLGERCRALWEEIRHPEHKQFSVAEVLEHERVQLMPMPAAFDGYVEKVARV SSTCLVSVARNRYSVPCELAGQMVSSHLYPTRVTVVAGDVVVAEHERLTDKGKTLYDWQHYIPLVQRKPGALRNGAPFTD LPESLQRLRRGLLRESGGDRLMARVLALVPTAGLEAVLVAVELALDGAPPSGRVSVEHVINVLARLNAAPRPANVQTSLQ VLTPPIADTARYDRLRDIQETGHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 3e-141 | 65 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 3e-90 | 46 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 3e-72 | 43 |
