Gene Information

Name : Ajs_3014 (Ajs_3014)
Accession : YP_987224.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 3182055 - 3183350 bp
Length : 1296 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: msu:MS1501 WecC protein

DNA sequence : 
ATGAATATTGACAATAAAACCATCGCTATCGTTGGTCTCGGTTATGTGGGTCTGCCGCTGGCGGTTGAATTTGGTAAACA
CCGGCCTGTCTTGGGCTTTGATATCAACACTGCCCGCATTGCTGAATTGCAAGCCGGCAAAGACCACACCCTCGAATGCA
GCCCTGAAGAGCTGAGCAATGCCACCCACCTGCGCTTCAGCGGTCAGGCAGACGACCTCAAGGCCTGTCAGATCTTCATC
GTCACGGTGCCCACGCCGGTGGGCCAGGCCAATCGGCCCGACCTGACACCCCTCGTCAAAGCCAGCGAAACCGTGGGCAA
GGCGCTGAAGGCGGGCGACATGGTCATCTACGAATCCACGGTGTATCCCGGCGCCACTGAAGAGGTGTGCGTGCCCGTGC
TGGAGCGTGTGAGTGGCTTGCGCTTCAACCACGACTTTTTTTGTGGCTACAGCCCCGAGCGCATCAACCCCGGCGACAAG
ATCAATACGCTTACCAAAATCAAAAAAATTACCAGTGGCAGCACTCCCGCAGTAGCCGACGCAGTGGATGCGCTCTACAA
CAGCATCATCACGGCCGGCACCCACAAAGCCAGCAGCCTGAAGGTAGCCGAAGCCGCGAAGGTGATTGAAAACACGCAGC
GTGATCTGAACATCGCCTTGGTCAATGAGTTGTCGGTCATTTTTGACCGCTTGGGCATCGACACCCTCGACGTGCTGGAG
GCGGCTGGCAGCAAGTGGAACTTTCTGCCCTTTCGCCCCGGCATGGTGGGTGGCCACTGCATTGGCGTTGACCCTTACTA
CCTCACCCACAAGGCCGAAGAGGTGGGTTACCACCCCCAAGTCATCCTTGCTGGGCGGCGCATCAACGACAACATGGCGC
GTTACGTAGCGCGCAACACCATCAAGCGCATGCTCAAAAACGGGCTGGACGTTCCTCGCTGCCGCATCGGCGTGCTGGGT
ATTACCTTCAAAGAAAACTGCCCCGACATCCGCAACAGCAAAGTTGCGGACATGGTGCGCGAATTTCAGGCCTGGGGTGC
CCAAGTGGTGGTGACCGACCCGTGGGCCGATGCTGATGAGGTTGCGCGCGAATACGGCCTGCAACTGGGCCAGATTGATG
TCGCCAATCCTGTGGACTCGCTGGTAGTCGCTGTGGGCCACAACGAATATCGCCAGGCTACACCCAACGAGTTGCGCGCC
CTGTGCCGCGGCTCCAAGCCCGTGCTGGCGGATGTTAAAAGCCTCTACAACCGTCACCAGGCGGCCGAAGCAGGCTTTAC
CGTGTTCCGACTGTAG

Protein sequence : 
MNIDNKTIAIVGLGYVGLPLAVEFGKHRPVLGFDINTARIAELQAGKDHTLECSPEELSNATHLRFSGQADDLKACQIFI
VTVPTPVGQANRPDLTPLVKASETVGKALKAGDMVIYESTVYPGATEEVCVPVLERVSGLRFNHDFFCGYSPERINPGDK
INTLTKIKKITSGSTPAVADAVDALYNSIITAGTHKASSLKVAEAAKVIENTQRDLNIALVNELSVIFDRLGIDTLDVLE
AAGSKWNFLPFRPGMVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKRMLKNGLDVPRCRIGVLG
ITFKENCPDIRNSKVADMVREFQAWGAQVVVTDPWADADEVAREYGLQLGQIDVANPVDSLVVAVGHNEYRQATPNELRA
LCRGSKPVLADVKSLYNRHQAAEAGFTVFRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-117 60
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-117 60
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-108 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_3014 YP_987224.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 3e-117 60