Gene Information

Name : Ajs_2944 (Ajs_2944)
Accession : YP_987157.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3114781 - 3115608 bp
Length : 828 bp
Strand : -
Note : PFAM: protein of unknown function DUF932; KEGG: rme:Rmet_3034 protein of unknown function DUF932

DNA sequence :
ATGCAACTCGCATCCCGCTTCGCTCACCACTCCCCCGCATTGCGCAGCGATGCCCCGCTGTCCGATGACCAGATTCGCAG
GGTGGCCCCGTCCATCTTCGCGGATGCCCCGCATGAGAGCCGTTCCGAGCGGTACAGCTACATCCCCACGGCTGCCGTGC
TGACCGAGCTTCGGAAAGAAGGGTTCCAGCCTTTCATGGTGACGCAGACCCGCGTGCGCGATGAAGGCAAGCGCGAGCAC
ACGAAACACATGCTGCGCTTACGCCATGCCAGCCAGATCAACGGCGCGGAGGCTAACGAAATCGTGCTGCTGAACTCGCA
CGACGGCACGAGCAGCTATCAGATGCTGGCCGGAATGTTCCGCTTCGTGTGTAGTAATGGCCTTGTCTGTGGTGACACCG
TGGCCGATGTGCGCGTGCCCCACAAAGGCAATGTGGCGGGCCAAGTCATTGAAGGCGCGTACGAGGTGTTGAGCGGCTTC
GAGCGGGTGCAGGAATCGCGCGACCTGATGCGCGGCATCACCTTGGACGATGGCGAATCAGAAGTGTTCGCCCGCGCCGC
GCTGGCCCTCAAGTACGACGACCCCGACAAGCCCGCGCCCATCACGGAATCGCAAATCCTGATGCCGCGCCGGTTCGATG
ACCGCCGCCCCGATCTGTGGAGCGTGTTCAACCGCACGCAGGAGAACTTGACCAAGGGCGGATTGCATGGCCGCGCCGCC
AATGGCCGCAGGCAGCAGACCCGCCCCGTGCAGGGCATTGATTCGGACATTCGCATCAATCGCGCCCTGTGGCTGCTGGC
CGATGGAATGCGCGCCCTCAAAGCCTGA

Protein sequence :
MQLASRFAHHSPALRSDAPLSDDQIRRVAPSIFADAPHESRSERYSYIPTAAVLTELRKEGFQPFMVTQTRVRDEGKREH
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGNVAGQVIEGAYEVLSGF
ERVQESRDLMRGITLDDGESEVFARAALALKYDDPDKPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTKGGLHGRAA
NGRRQQTRPVQGIDSDIRINRALWLLADGMRALKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-106 79
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 3e-107 77
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 6e-72 54
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-72 54
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-71 53
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-71 53
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-71 53
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-71 53
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-71 53
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 5e-72 53
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 5e-72 53
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-73 53
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 5e-70 53
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 6e-71 53
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-71 53
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-71 53
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-71 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_2944 YP_987157.1 hypothetical protein VFG1526 Protein 1e-72 54
Ajs_2944 YP_987157.1 hypothetical protein VFG1676 Protein 3e-70 53
Ajs_2944 YP_987157.1 hypothetical protein VFG0658 Protein 1e-71 53
Ajs_2944 YP_987157.1 hypothetical protein VFG1615 Protein 4e-71 53