|
Name : Ajs_2927 (Ajs_2927) Accession : YP_987142.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : transposase, IS4 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 3099511 - 3100470 bp Length : 960 bp Strand : + Note : PFAM: transposase, IS4 family protein; KEGG: rso:RSc1704 ISRSO18-transposase protein DNA sequence : ATGAAGCAAACCGATCTGGGGCTGAACCTCACGACCAAGCGCACGCGCAAGCGAGAGTTCCTCGCGCAGATGGAACGCGT GGTGCCTTGGGCGACGCTCGTTGAACTGGTGGCGCCGTATGCGCCCGAAGGCAAGAAGGGTCGCCCGCCGTTTGCCGTGG AGACGATGCTGCGCATCCACTTCATGCAGCAGTGGTTCACGCTCTCTGACCCGGCGATGGAAGAGGCCTTGCACGACGTG CCGTTGTTCCGCGAGTTCGCCAGCCTGGGCTGGGACAGCCGGCTGCCCGACGAGAGCACCATCCTTCGATTTCGCCATCT GCTGGAGCGCCACAAGCTGGCCGACCAGATCCTGGCGCTGGTCAACGATCTTCTGACGGGCAAGGGCTTGCTGCTCAAAG CCGGTACGGTGGTCGATGCCACGCTGATCGCAGCGCCGAGTTCGACCAAGAACAAGGACGGCCAGCGCGACCCCGAGATG CACCAGAGCAAGAAGGGCAACCAGTGGTTCTTCGGGATGAAGGCCCATATTGGCGTGGACGCCGACTCTGGGCTGGTGCA CACGGTGCGCGGCACCGCGGGCAACGTGAACGACGTGCTCGAAGCCAACAGCCTCTTGCATGGGCAGGAGAGCGACGTGT TCGCCGATGCGGGCTACCAGGGCGCAGCCAAGCGGCCTGACGCCAGAGCGGGCGTCAACTGGCGCATCGCCATGCGCCCG GGCAAGCGTCGGGTGTTGGACAAGGCCGACGAGATCGACGCGCTGGTCGACAAGATCGAGAAGCTCAAGGCGAGCGTGCG CGCCAAGGTGGAGCATCCGTTCCGGGTGATCAAGCGCCAGTTCGGTCACACCAAGGTGCGCTACCGCGGATTGAAGAAGA ACACGGCGCAGCTGGTCACACTGTTTGCGCTGTCGAACCTGTGGATGGTGCGCGGCAAACTGATGGCTGCGCAGGCATGA Protein sequence : MKQTDLGLNLTTKRTRKREFLAQMERVVPWATLVELVAPYAPEGKKGRPPFAVETMLRIHFMQQWFTLSDPAMEEALHDV PLFREFASLGWDSRLPDESTILRFRHLLERHKLADQILALVNDLLTGKGLLLKAGTVVDATLIAAPSSTKNKDGQRDPEM HQSKKGNQWFFGMKAHIGVDADSGLVHTVRGTAGNVNDVLEANSLLHGQESDVFADAGYQGAAKRPDARAGVNWRIAMRP GKRRVLDKADEIDALVDKIEKLKASVRAKVEHPFRVIKRQFGHTKVRYRGLKKNTAQLVTLFALSNLWMVRGKLMAAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 1e-69 | 61 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 9e-70 | 61 |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 2e-84 | 61 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 2e-55 | 56 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 5e-63 | 50 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 5e-63 | 50 |
