Gene Information

Name : Ajs_2824 (Ajs_2824)
Accession : YP_987041.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2989180 - 2989950 bp
Length : 771 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3186 ABC transporter related

DNA sequence :
ATGATGGCGCCCGCCGATGCGCAGCCGCTGATCCGCCTGCGCGGCATCACCAAGGTGTACGGCGAGGGCGCGCTGGCCTT
CCAGGCGCTCAAGGGCGTGGACCTGGACATCGACAGCGGCGACTTCGTGGCCATCATGGGCCCCAGCGGCTCGGGCAAAT
CCACGGCCATGAACGTGCTGGGCTGCCTGGACCGGCCCACCGCGGGCACCTACCTGTTTCGCGGGCTGCCGGTGCACTCG
CTGTCGCGCGACGACCGTGCGCGGCTGCGGCGGCGCTTCCTGGGCTTCGTGTTCCAGGGCTTCAACCTGCTGGCGCGTAC
CTCGGCGCAGGAGAACGTGGAGCTGCCGCTGCTGTACCGCGGCGAGAGCACGGCCGCGCGCCATGCGGCTGCGGCCCGCG
CCCTGGACGCCGTGGGCCTCAAGGGCTGGGAGCACCACACACCGGCCGAGCTGTCCGGCGGCCAACAGCAGCGCGTGGCG
ATTGCGCGCGCCATCGTCACCGAGCCTACGGTGCTGCTGGCCGACGAGCCCACCGGCAACCTGGACACGCAGCGCAGCCG
CGAGATCATGGAACTGCTGTGGCGCCTGAACACCGAGCAGGGCATCACCGTGCTCATGGTCACGCACGAGCCCGACATGG
CGCAGTACGCACGGCGCATCGTGCGCTTCGTGGACGGGCGCATCGAAAGCGACGAGCGCAATCCGCACCCGCATGCGCAG
GTGCCCCGGGAAGCGCCTGCAAGTGCAGGCACGGGGGAGGTGGCGCCATGA

Protein sequence :
MMAPADAQPLIRLRGITKVYGEGALAFQALKGVDLDIDSGDFVAIMGPSGSGKSTAMNVLGCLDRPTAGTYLFRGLPVHS
LSRDDRARLRRRFLGFVFQGFNLLARTSAQENVELPLLYRGESTAARHAAAARALDAVGLKGWEHHTPAELSGGQQQRVA
IARAIVTEPTVLLADEPTGNLDTQRSREIMELLWRLNTEQGITVLMVTHEPDMAQYARRIVRFVDGRIESDERNPHPHAQ
VPREAPASAGTGEVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_2824 YP_987041.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-46 52
Ajs_2824 YP_987041.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-38 51
Ajs_2824 YP_987041.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-32 43
Ajs_2824 YP_987041.1 ABC transporter-like protein CP001581.1.gene598.p Protein 8e-31 41