Gene Information

Name : Ajs_2718 (Ajs_2718)
Accession : YP_986937.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : transposase, IS4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 2883245 - 2884237 bp
Length : 993 bp
Strand : -
Note : PFAM: transposase, IS4 family protein; KEGG: rso:RSp1136 ISRSO18-transposase protein

DNA sequence :
ATGAAGCAGATGAGCCTTGGCACCACCGGATTCGAACGCAAGACCAAGCGTACACGCAAGCGCGAGTTCTTGGACGAGAT
GAACCTGGTGGTGCCGTGGGCCGCACTGGTGGCGCTGATTGCCCCGCATGCACCGGCGCGCAGCCCCAAGGGCGGACGCC
CGCCGTTTGCTGTCGAGACCCTGCTGCGTATCCACTTCCTGCAACAGTGGTTCAACCTGTCCGACCCGGCCATGGAAGAG
GCGCTGTACGACACGCCGATGTTTCGCGAGTTTGCCGGGCTGGACATGGGCGAAGAGAACCTGCCCGATGAGAGCACCAT
CCTGCGGTTCCGGCATTTGCTCGAAGAGCACAACCTCGCGTTGCAAATCCTGGCCACCGTCAACGCCACGCTGACGGCCA
AGGGCTTGCTGCTCAAGCAGGGCACGGTGGTCGACGCCACACTGATTGCGGCGCCGAGTTCCACCAAAAACCGTACGGGA
GAGCGTGACCCTGAGATGCACCAGACCAAGAAGGGCAACCAGTGGCACTTTGGCATGAAGGCCCATGCTGGCGTGGATGC
CGACTCGGGCCTGGTGCACACGGTGGTGACCACGGCGGCCAACGCCCACGACATCACCCAGGCCCATGCGCTGCTGCACG
GGCAGGAAACCGACGTCTTTGCGGACGCGGGCTACCGGGGCGTGGACAAACGCGAAGAAATTCAGACCCAACACCCCAAC
GTGCGCTGGCACGTTGCCATGATGCCGGGCAAGCGCAAAACGCTGGACAAGGGCTCGCTGATGGGCGCGCTGCTGGATGC
GCTGGAGACGACCAAGGCGCGCATCCGCGCCAAGGTGGAGCACCCGTTTCGCGTCATCAAGCGCCAGTTCGGCTACGTCA
AGGTCAAGTACCGGGGCCTGGCCAAGAACACGGCCAACCTGATGACGCTGTTCGCGCTGTCCAACCTGTGGATGGTGCGC
AAGCGACTTTTGAACATGGGAGCGCGGGGATGA

Protein sequence :
MKQMSLGTTGFERKTKRTRKREFLDEMNLVVPWAALVALIAPHAPARSPKGGRPPFAVETLLRIHFLQQWFNLSDPAMEE
ALYDTPMFREFAGLDMGEENLPDESTILRFRHLLEEHNLALQILATVNATLTAKGLLLKQGTVVDATLIAAPSSTKNRTG
ERDPEMHQTKKGNQWHFGMKAHAGVDADSGLVHTVVTTAANAHDITQAHALLHGQETDVFADAGYRGVDKREEIQTQHPN
VRWHVAMMPGKRKTLDKGSLMGALLDALETTKARIRAKVEHPFRVIKRQFGYVKVKYRGLAKNTANLMTLFALSNLWMVR
KRLLNMGARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 2e-78 61
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 3e-78 61
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 2e-87 60
unnamed AAO33449.1 putative transposase Not tested Not named Protein 3e-65 56
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 4e-64 51
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 4e-64 51