Gene Information

Name : Ajs_2270 (Ajs_2270)
Accession : YP_986509.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2401872 - 2402624 bp
Length : 753 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_2425 ABC transporter related

DNA sequence : 
ATGCTTCACTGCCGAGAACCTTTCATGTCCGAAACCTCCGCCGCCGCGGCCCCTGCCGCCTCCAACGACCGCATGCCGCC
CGAATCCATCATCGCGGTGGAGCATGTGTCCAAGTCCGTCACGGACTCCACGGGTACGCTGGAGATTTTGCGGGATATCG
ATTTCCGCCTGGCGCCGCGGGAGACTGCGGCCATCGTGGGCGCCTCGGGATCGGGCAAGAGCACGCTGCTGTCCATCATC
GCCGGGCTGGACACGCCCACGCGCGGCACGGTGCGCCTGGGCGGGCAGGACCTGTTCGCACTGGACGAGGACGACCGCGC
CGCACTGCGCGCCCGGCAGGTGGGCTTCGTGTTCCAGAGCTTTCAGCTCATGGGCAACCTCACGGCGCTGGAGAACGTGA
TGCTGCCGCTCGAGTTGGCGGGCATTCGCGATGCACGCCGCCGCGCGACCGACATGCTGGAGCGCGTTGGCCTGGGCCAG
CGCCTGACGCACTATCCCAAGGTGCTGTCGGGCGGCGAGCAGCAGCGCGTGGCGCTGGCACGCGCCTTCGTGGTGGAGCC
CGCCGTGCTACTGGCCGACGAGCCCACGGGCAGCCTGGACTTCGCCACGGGAGAGACCATCATGGAACTGATGCTGGCCC
TCAACCGCGAGCAGGGCACCACGCTGGTGCTGGTCACGCACGACCGCGGCATTGCCGCGCGCTGCGACCGGCGCATCACC
ATTGAGGCCGGACGGCTGGTCGATAACTCCTGA

Protein sequence : 
MLHCREPFMSETSAAAAPAASNDRMPPESIIAVEHVSKSVTDSTGTLEILRDIDFRLAPRETAAIVGASGSGKSTLLSII
AGLDTPTRGTVRLGGQDLFALDEDDRAALRARQVGFVFQSFQLMGNLTALENVMLPLELAGIRDARRRATDMLERVGLGQ
RLTHYPKVLSGGEQQRVALARAFVVEPAVLLADEPTGSLDFATGETIMELMLALNREQGTTLVLVTHDRGIAARCDRRIT
IEAGRLVDNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_2270 YP_986509.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-38 47
Ajs_2270 YP_986509.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-30 46