|
Name : Ajs_2233 (Ajs_2233) Accession : YP_986473.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2366559 - 2368574 bp Length : 2016 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGCGTGTTCCTGTGCGAGAAGCCGTCCCAGGGCAAGGACATCGCCCGTGTGCTGGGTGCCGGCCACCGCGGCAACGG CTGCTACAGTGGCGCCGGTGTCGTCGTGACCTGGTGCATCGGTCATCTGGTGGAGGCGGTTCCGCCCGAAGGCTACGGCG ATCAATACAAGCGCTGGGCCATCGAGCAACTGCCTATTCTTCCTGAGCGTTGGCGTGTCGAGCCCAAGGCGGCGACCGCG GCGCAATTCAAGGTCGTGCAGCAGCTCGTCGCCAAGGCGGGCGAGCTGGTGATTGCGACCGACGCCGACCGCGAGGGCGA GATGATCGCCCGCGAGATCATCGACCTGTGCGGCTACCACGGGCCGATTCAGCGCCTGTGGCTGTCGGCGCTCAACGATG CGTCGATCCGCAAGGCGCTGGGTGCGCTCAAGCCGTCCGCCGAGACGCTGCCGCTGTATTTCTCCGCACTCGCCCGATCG CGCGCCGACTGGCTGATCGGGATGAACTTGAGCCGCTTGTTCACACTGCTGGGGCGTCAGGCCGGCTATATGGGCGTGCT GTCGGTGGGGCGCGTGCAGACGCCGACGCTGAAGTTGGTGGTGGATCGTGATCGCGAGATCGCGCGCTTCGTCTCTGTGC CGTATTGGGCCGTGGACGTGCTGCTATCCCATGCCGGCCGGTCCTTCACCGCGAGCTGGATACCGCCCGAAGGCAGCACC GATGCAGCGGGTCGCTGCCTTCAGCAGCCGGTGGCGCAGCAGGCTGCGGATTGCATTCGCGCCGCACGCGATGCGCAGGT CGTGTCGGTGGACACCGAGCGCGTGCGCGAGGCACCGCCGCTGCCGTTCGACCTGGGCACGCTGCAGGAGGTGTGCTCCA AGCAGTTGGGCCTCGACGTGCAGGAGACGCTGGACATCGCGCAGGCGCTGTACGAGACGCACAAGGCGACGACCTATCCG CGCAGCGACTCGGGATACCTGCCCGAAAGCATGCTCGCGGAAGTGCCGGCGGTGCTCGATGCACTGCTCGCCACCGATCC CAGCCTGCGGCCCTTGATCGGCCAGCTCGACCGCAACCAGCGTTCGCGCGCCTGGAACGACGGCAAGGTGACGGCTCACC ACGGCATCATCCCGACGCTGGAGCCCGCTAACCTGTCGGCCATGAACGAGAAGGAACTGGCCGTCTACCGGCTGATCCGC GCTCATTACCTCGCGCAGTTCCTCCCGCACCATGAGTTCGACCGGACGGTAGCGCAGTTCTCGTGCGGCAGTCAGTCGCT GGCGGCCGTGGGCAAGCAGATCGCCGTCACCGGCTGGCGCGAGGTGCTGGCGACGCCGGGGCCGGACGATGCCGACGGCG AGGATGCGCAGCGCAGCCAGGTGCTGCCGGCGCTGCATGCGGGCCTGTCCTGTCCGGTCGGCAAGGTGGATCTCAAGGCG CTGAAGACGCTGCCGCCCAAGCCCTACACGCAGGGCGAGCTGATCAAGGCCATGAAGACTGTCGCCAAGTTCGTGACCGA CCCGCGGCTGAAACAGAAGCTGCGAGATACCACAGGCATCGGCACCGAGGCGACACGCGCCAACACCATCAACGGTCTGA TCGGTCGCGGCTACCTGGTCAAGAAAGGCCGCGCCGTCCGCGCTTCCGATGCGGCATTCACGCTCATCGACGCGGTGCCC TCGGCCATCGCCGACCCCGGCACCACGGCGGTGTGGGAGCAGGCGCTGGACATGATCGAGGCCGGCCAGATGGCGCTGGA CACCTTCATCGAGAAGCAGTCCGTGTGGGTCGGCCAGCTCGTGCAGCAGTACCGCGGCGCAACGCTCTCGCTCAAGCTGC CGCCGGCGCCGGCCTGCCCGCAGTGCGGCGCACCGATGCAGCAGCGCACGGGCAAGAGCGGCGCGTTCTGGTCCTGTTCG CGCTACCCGGACTGCAAGGGCACGTTGCCGATCGAGTCCCCGACGGGCCGGCGCAGCGCACCGCGCAAGCGGTGCGCTGC CTCCAAGGCGTCCTGA Protein sequence : MRVFLCEKPSQGKDIARVLGAGHRGNGCYSGAGVVVTWCIGHLVEAVPPEGYGDQYKRWAIEQLPILPERWRVEPKAATA AQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYHGPIQRLWLSALNDASIRKALGALKPSAETLPLYFSALARS RADWLIGMNLSRLFTLLGRQAGYMGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAVDVLLSHAGRSFTASWIPPEGST DAAGRCLQQPVAQQAADCIRAARDAQVVSVDTERVREAPPLPFDLGTLQEVCSKQLGLDVQETLDIAQALYETHKATTYP RSDSGYLPESMLAEVPAVLDALLATDPSLRPLIGQLDRNQRSRAWNDGKVTAHHGIIPTLEPANLSAMNEKELAVYRLIR AHYLAQFLPHHEFDRTVAQFSCGSQSLAAVGKQIAVTGWREVLATPGPDDADGEDAQRSQVLPALHAGLSCPVGKVDLKA LKTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANTINGLIGRGYLVKKGRAVRASDAAFTLIDAVP SAIADPGTTAVWEQALDMIEAGQMALDTFIEKQSVWVGQLVQQYRGATLSLKLPPAPACPQCGAPMQQRTGKSGAFWSCS RYPDCKGTLPIESPTGRRSAPRKRCAASKAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 79 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 78 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 65 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 6e-161 | 51 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 5e-163 | 50 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 6e-163 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 6e-163 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 3e-161 | 50 |
