Gene Information

Name : Ajs_2208 (Ajs_2208)
Accession : YP_986449.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3505
EC number : -
Position : 2342331 - 2344487 bp
Length : 2157 bp
Strand : -
Note : KEGG: eba:ebA2421 hypothetical protein

DNA sequence :
ATGGCCCAACCGCATGCGGTCGAGGTTCTGCTGCGGCCAGCGGTGGAGCTTCATACCGTGGCGGTCTGCACCGGCGCCGC
GATTCTGTGCCTGGTGGCACCGTGGTCGCTCGCGCTGAACCCGCTGCTCGGCCTGGGCTCGGCACTGGCCTTCCTGATCT
TCGGCGCGATTCGCCTGCGCGATGCCTGGGCGATCCTGCGCTATCGCCGCAACATCCGCCGCCTGCCGCGCTACGTGATG
ACCAGCCGCGACGTGCCGGTGAGCCAACAGCGGCTGTTCGTCGGCCGAGGCTTTCGCTGGGAGCAGCGGCACACGCACCG
GCTGATGCAGACCTACCGGCCGGGGTTCCGCCGCTATGTCGAGCCGACGGCGATCTACCGGGCCGCCCGGCGGCTGGAGG
AGCGGCTTGAGTTCGCGCCGTTTCCCGTCTCGACACTGGCGCGCGCGCTGGCCTGGGACAGCCCGCTCAACCCGGCGCGA
CCGCTGCCGCCGGTCGGCGGACTGCCACGCCTGCATGGCATCGAGCCGCACGAGGTCGACGTCACGCTGCCGCTGGGCGA
GCGCGTCGGCCACTCCCTGGTGCTGGGCACCACGCGCGTGGGCAAGACGCGGCTGGCCGAGCTGTTCATCACCCAGGACA
TCCGCCGCAAGGTCCGCGGCGAGCACGAGGTGGTGATCGTCTTCGACCCCAAGGGCGACGCCGACCTGTTGAAGCGCATG
TACGTCGAGGCCAAGCGCGCCGGGCGCGAAGGCGAGTTCTACGTGTTCCATCTGGGCTGGCCCGACATCTCGGCGCGCTA
CAACGCCGTGGGCCGGTTCGGGCGGATCTCCGAGGTGGCCACGCGCATCGCCGGACAGCTCTCGGGCGAGGGCAACAGCG
CGGCGTTCCGCGAGTTCGCCTGGCGCTTCGTCAACATCATCGCGCGCGCCCTGGTCGAGCTGGGGCAGCGTCCGGACTAC
CTGCTGATCCAGCGCCACGTCATCAACATCGACGCGCTGTTCATCGAGTACGCCCAGCACTACTTCGCCAAGAACGAGCC
GAAGGCCTGGGAGGTCATCGTCCAGCTCGAAGGCAAGCTCAACGAGAAGAACATCCCGCGCAACATGATCGGGCGCGAGA
AGCGCGTGGTGGCCCTCGAACAGTACCTGTCCCAGGTGCGCATCTATGACCCGGTGCTCGACGGCCTGCGCAGCGCCGTG
CGCTACGACCGGACGTACTTCGACAAGATCGTCGCTTCGCTGCTGCCGCTGCTGGAGAAGCTCACCACCGGCAAGATCGC
GCAACTGCTCGCACCGAACTATTCCGACCTGTCCGACCCGCGGCCGATCTTCGACTGGATGCAGGTCATCCGCAAGCGCG
CGGTGGTCTACGTGGGGCTGGATGCGCTGTCCGACGCCGAAGTCGCGGCAGCGGTGGGCAACTCGATGTTCAGCGACCTG
GTCTCGGTGGCCGGCCACATCTACAAGTTCGGCATCGATGACGGGCTGCCCGGCGCCGCGGTGAGCGCCAAGATTCCGAT
CAACGTCCACGCCGACGAATTCAATGAACTCATGGGCGACGAGTTCATTCCGATGGTCAACAAGGGCGGCGGTGCCGGCG
TACAGGTGACGGCCTACACGCAGACCTTGAGCGACATCGAGGCGCGCATCGGCAACCGTGCCAAGGCCGGCCAGGTGGTC
GGCAACTTCAACAACCTGTTCATGCTGCGCGTGCGCGAGACCGCCACCGCCGAGCTGCTGACGCGACAACTGCCCAAGGT
CGAGGTGTACGCCACGGCACTGATGAGCGGCGCCACCGACAGCTCCGACCCGCACGGCAATACCGCGTTCACGTCCAACA
CGCAGGACCGCATCAGCACGACCAGCGTGCCGTTGATCGAGCCCGCGCATGTGGTGGCGCTACCGAAGGGGCAGTGCTTC
GCGCTGATCGAGGGCGGCAACCTCTGGAAAGTCCGCATGCCGCTGCCGGCACCCGACCCCGACGAAGCCATGCCGAAGGA
TCTGCAGGAGCTGGCCGGCTACATGCGGCAGCACTACGTCGAGGCAGGAGACTGGTGGGAGAACCAAGGCATCCCCGGCC
TGCAGGACAAGGCGCTGCCCGACGACCTGCTGGACGACTTCAAGCGGATGGCCGCCGCTGAAGAGGCCGAAGCATGA

Protein sequence :
MAQPHAVEVLLRPAVELHTVAVCTGAAILCLVAPWSLALNPLLGLGSALAFLIFGAIRLRDAWAILRYRRNIRRLPRYVM
TSRDVPVSQQRLFVGRGFRWEQRHTHRLMQTYRPGFRRYVEPTAIYRAARRLEERLEFAPFPVSTLARALAWDSPLNPAR
PLPPVGGLPRLHGIEPHEVDVTLPLGERVGHSLVLGTTRVGKTRLAELFITQDIRRKVRGEHEVVIVFDPKGDADLLKRM
YVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDY
LLIQRHVINIDALFIEYAQHYFAKNEPKAWEVIVQLEGKLNEKNIPRNMIGREKRVVALEQYLSQVRIYDPVLDGLRSAV
RYDRTYFDKIVASLLPLLEKLTTGKIAQLLAPNYSDLSDPRPIFDWMQVIRKRAVVYVGLDALSDAEVAAAVGNSMFSDL
VSVAGHIYKFGIDDGLPGAAVSAKIPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYTQTLSDIEARIGNRAKAGQVV
GNFNNLFMLRVRETATAELLTRQLPKVEVYATALMSGATDSSDPHGNTAFTSNTQDRISTTSVPLIEPAHVVALPKGQCF
ALIEGGNLWKVRMPLPAPDPDEAMPKDLQELAGYMRQHYVEAGDWWENQGIPGLQDKALPDDLLDDFKRMAAAEEAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 87
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 86
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 0.0 74
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 0.0 70
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 0.0 70
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 69
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 0.0 63
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 0.0 63
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 0.0 62
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 0.0 61
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 0.0 61
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 0.0 60
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 0.0 57
traD AAW83057.1 TraD Not tested GGI Protein 9e-126 49