Gene Information

Name : Ajs_2188 (Ajs_2188)
Accession : YP_986429.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2316755 - 2318188 bp
Length : 1434 bp
Strand : -
Note : KEGG: eba:ebA2408 hypothetical protein

DNA sequence :
ATGAAAAGTAATCCGTTGCTCAAGTGGCTGCTGATCCCGATGGCGCTGCTGCTGGTGTTCGTCGGCATCAAGCTGTTCTC
CGGCGCGCCCGGCGGCCAGCCCGCTCCCAAGGGCGCGGCCAGTACGCTCACGCCCGAGGAGATGAAAGCCCTGGGCATCG
CTGGCGACACGCCGCGCGATACCGTCGCCACGCTGGTGGCCCAGGTGAAGCAGTTGCGCACCGAGCTGCAGAGCGCGCTG
GGCGACAACAAGCAGCACAAGGCCGAGAACGAGCGCCTGCGCGCGCGGGAAAGCGCGATCGACCAACGCATCCAGAGCGC
GCTGGAAGGCGAGCGCAGCCGCCTGGAGCAGGAGCGCAATCAGGTGGCCAGCGACAGGCAGCAGACCCAGGGGCTGCTGC
AGGATCTGCAGCGGCAACTGGACGGCCTTTCCGGCAAGGGTGGCCCGTCCGATCTGCCCGTCGGGCTGGGGCTCGAAGAG
GGTGACGGCCAGCGCTTCAACCGCGGCGTCGCTAGCACGCAGTGGGTCGAGCCCGACGATGCCAAGGTCGACGCCAAGAA
CAGCAGCAAGGAGCCGAGCTTTCCCCTGAGCTTCGGGCCGGCCCAGAAAAGCCTGTCGGCCGCAGTGGAATCCGTCGCCG
ACGTCGGCAGCCGCGCGGTGGGCGCATCCACGAAGGCTGTCTACACCGTGCCGTCGAACTCGACGCTCATGGGGTCGATT
GCCATGACGGCGCTGATCGGGCGCGTGCCAATCGATGGAACCGTCAACGATCCCTATCCGTTCAAGGTGCTGATCGGCCC
GGACAACCTCACGGCCAACGGCATCGACATCCCCGACGTGGCCGGCGCCGTGGTCAGCGGCACGGCCTCGGGCGACTGGA
CGCTCTCGTGCGTGCGCGGGCAAATCCGCTCGGTCACGTTCGTGTTCCAGGACGGCACCATCCGCACGGTGCCGGAGGAC
AGCAGCAAGGGCGGCAGCAGCGGCGGCAACTCGGGGCACAACGGCGCCAGCATCCAAGGCGGTCTGGGCTGGATCAGCGA
CCCCTACGGCATTCCCTGCGTCAGCGGCGAGCGGCGCAGCAACGCCCAGCAGTACCTGGGCAGCCAGGCGCTCATCACCG
CGGCCGGCGCCGGCGCGGCCTCGCTCATCAAGTCCGACAACGGCAGCGTGGCCGTGGTCGCCAACAGCAACGGCTCGCTG
GGCACCGTCGGCATCAGCGGCAACGAAGCGATGGGCCGCATCCTCGCGGGCGGCGTGCGCGACATGGCCGATTGGGTCAA
CAAGCTCTACGGCCAGGCCTTCGCGGCGGTCTACGTGCAGCCGGGCGCCAAAGTGGCCGTGCACCTGGAGCAGCCGCTCG
ACATCGACTACGACGCCAAGGGGCGTCGGGTCCACCACCGCACCGGAGAAGCCCATGCCTCGGATCTGGATTGA

Protein sequence :
MKSNPLLKWLLIPMALLLVFVGIKLFSGAPGGQPAPKGAASTLTPEEMKALGIAGDTPRDTVATLVAQVKQLRTELQSAL
GDNKQHKAENERLRARESAIDQRIQSALEGERSRLEQERNQVASDRQQTQGLLQDLQRQLDGLSGKGGPSDLPVGLGLEE
GDGQRFNRGVASTQWVEPDDAKVDAKNSSKEPSFPLSFGPAQKSLSAAVESVADVGSRAVGASTKAVYTVPSNSTLMGSI
AMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDIPDVAGAVVSGTASGDWTLSCVRGQIRSVTFVFQDGTIRTVPED
SSKGGSSGGNSGHNGASIQGGLGWISDPYGIPCVSGERRSNAQQYLGSQALITAAGAGAASLIKSDNGSVAVVANSNGSL
GTVGISGNEAMGRILAGGVRDMADWVNKLYGQAFAAVYVQPGAKVAVHLEQPLDIDYDAKGRRVHHRTGEAHASDLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-144 69
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-137 69
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-97 51
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 2e-108 50
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 1e-101 49
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-101 49
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 6e-73 42