Gene Information

Name : Ajs_2046 (Ajs_2046)
Accession : YP_986298.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2156795 - 2157586 bp
Length : 792 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: pol:Bpro_3536 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGTCCCAAACACTCACCACGTCAACTATCTCCTTCGGCCATCACGGTCGCGTGTGTATTGTCACGGGCGGTGCCCAGGG
CATTGGCGAGGCCTGCGTGCGCAGGCTGGCGCGCGACGGTGCCAAGGTGGTGATCGCAGACATGGATGATGCCCGCGGAC
GTGCTCTTGCCGATGCGGTGCCGCAAGCCGCCTACATTCATTGCGATGTGGGCAACAAGTCCGAAGTGGATGCCCTGGTA
GGTCAAACCATGGCGCTGCACGGGCGCATCGACGTATTGGTCAACAACGCGGGCATCTTCCGCGCTGCGGACTTTCTGGA
TGTGACCGAGGAGGACTTCGACGCGGTACTGCGCGTGAACCTCAAGGGTGCCTTTCTCATGGGCCAGGCCGTGGCACGCG
AAATGGTGCGCTCGGGCGGCGGCAGCATCGTGAACATGAGTTCCGTCAATGGCGTTTTGGCCATTCCGAACATCGCCAGC
TACAACGTGAGCAAGGGCGGCATCAATCAGCTCACCCGCGTGATGGCGCTGGCGCTGGCGGACCGTGGCATCCGCGTGAA
CGCGGTGGCGCCCGGCACCATTGCCACGGAACTCGCCGCGAAGGCCGTGCTGACGAGCGACGAGGCCCGGCTCAAGATCC
TGAGCCGCACGCCGATGAAGCGCCTGGGTGAGCCTTCGGAGGTCGCTGATGTGGTGGCATGGCTCGCCAGCGACGCCGCC
AGTTATGTGACCGGCGAGATCGTCACCGTGGACGGCGGCCGCATGACGCTCAACTACACCGTGCCGGTCTAG

Protein sequence :
MSQTLTTSTISFGHHGRVCIVTGGAQGIGEACVRRLARDGAKVVIADMDDARGRALADAVPQAAYIHCDVGNKSEVDALV
GQTMALHGRIDVLVNNAGIFRAADFLDVTEEDFDAVLRVNLKGAFLMGQAVAREMVRSGGGSIVNMSSVNGVLAIPNIAS
YNVSKGGINQLTRVMALALADRGIRVNAVAPGTIATELAAKAVLTSDEARLKILSRTPMKRLGEPSEVADVVAWLASDAA
SYVTGEIVTVDGGRMTLNYTVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 4e-29 41