Gene Information

Name : Ajs_1977 (Ajs_1977)
Accession : YP_986229.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2075379 - 2077232 bp
Length : 1854 bp
Strand : -
Note : PFAM: phage integrase family protein; KEGG: net:Neut_0006 phage integrase family protein

DNA sequence :
ATGGCACTCTCAGACCTGGCCGTTCGACAGGCCAAGGCAACCGGCAAGGCATACACCCTCCCTGACTTGGATGGCCTCTC
CCTGGCCGTCACCGCTGCAGGGGGCAGGACTTGGCACTTCCGCTACTACTGGGCGGGCAAGCAGAAGCGGATGTCGCTCG
GCACCTACCCGGAGGTGACGCTTCGCGAGGCCCGCAGCCTGCGCGACGAAGCGCGCGCCCTGCTGGCCAAAGGCACCAAT
CCTCGCGTACACCGCAAGCAGAAGCGCACTGCTGTCCGGCTCGCCGACGAAAACACCTTCGAGGCGGTGTATCGCAAGTG
GCTCAAGCATCGCGGGCTCACCCTCAAGGAAGGCCGGCAGACGACCCTCTCGATACTTCCGCGCATCTTCGACAAGGATG
TGCTGCCCACCTTGGGCAAACGGTCGATCTATGAGATCAAGCGTCCCGACCTCTTGGAGGTGATCGCCAAGATCGAGAAG
CGCAGGGCGCTCTCCGTCGCCGAGAAAGTCAGGACGTGGTTCAACCAACTGTTCCGCTACGCGCTGGTGATCGTGCCGGG
CCTGGAGCAGAACCCTGCCTCCGATCTCGATGTGGTGGCGCTGCCGCTGCCACCCGTCAACCACAACCCGTTCCTGCGCA
TGGCCGAGCTGCCGAAGCTGTTGCAGAGGCTGCGCAGCTATCGCGGCAGGCGGCAGACCCAGCTCGGGCTGCGGCTATTG
CTGCTGACCGGCGTGCGAACCGGCGAGCTGCGACAGGCGACGCCGGATCAATTCGATCTGGACCGCGGGCTGTGGATCAT
CCCGCCCGACGTCGTGAAGCAACTCCAGTTGGATATGCGCAAGAAGCGGCAGCAGCCAAAGGACATCCCGCCCTACATCG
TGCCGCTGTCGATTCAGGCCATGGAGATCGTCCGGCACCTGCTGGATGAGTTCAAGCCGGCCCAGCGCCACCTGTTCCGA
CACGACAGCGACTTGAAGAAGCGCATCAGCGAGAACACGCTCAATGGTGCGCTCAAACGCATGGGCTATCAGGAACGCCT
GACCGGACACGGTATCCGCGGCACGATGTCCACTGCGCTCAACGAGATCGGCTACCCGAAGGTCTGGGTGGATGCACAGC
TCTCGCATGTCGATCCCAACAAGGTCAGCGCGACCTACAACCATGCCGAGTACGTGGAGCAGCGTCGCCGCATGATGCAG
GACTGGGCCGATCGGCTCGACCTCTTCGAGCAGAACCAGGTCGAGGCGGCCAGCATGCCGCTCACCGTGCATCTGGAAGG
CGTTCCCGCGTTCCCGAATGAGCAAACCGCAAGCGCACCCTCCACGCCGGTTGCCGCTTCGCCAATCCTGCTCGTGACGA
AGCCCGGCGACGCCATGCCGTTGGTTTCTGCCGCCGCACATCGGCTGCCGGCGGTTCCGCCCCCTCGATCGGCCGCGCCG
CTGGTGCCTTCGGACATTCAGCGCGAGAGGATGGAGCTGTTCGATGTCTTCGAGGCGCCGCACAACCTTCCCGTCGCTGC
GTTTGCGAAGATGGCGGGCAAGTCCCGCAGGTGGATCAGCTACGAGATCAAGGCGGGCAACTTGCTGGCGTTGAACGTGG
GCAACCGCGGCCAGCGGGTGCCGGACTGGCACCTCGACCCACTCAAGCACGAGCTGATCCAGTCCGTCCTCAAGCTGACC
AGGGGTGCCGACCCTTGGCAGATCTACCATGCACTGCTGCAGCCGCGCTCGATGCTGCGGGGGCGTTCGGCACTGGAGGG
CGTGACGGCCAGCAATCTCGACAAGCTCGTCATGGCAGTGAGCACAGCCGTGAAGGAAAGCGAGTGGTCCCCGCAGCAGG
CGAGGTTGGCCTGA

Protein sequence :
MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVTLREARSLRDEARALLAKGTN
PRVHRKQKRTAVRLADENTFEAVYRKWLKHRGLTLKEGRQTTLSILPRIFDKDVLPTLGKRSIYEIKRPDLLEVIAKIEK
RRALSVAEKVRTWFNQLFRYALVIVPGLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRSYRGRRQTQLGLRLL
LLTGVRTGELRQATPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQPKDIPPYIVPLSIQAMEIVRHLLDEFKPAQRHLFR
HDSDLKKRISENTLNGALKRMGYQERLTGHGIRGTMSTALNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQ
DWADRLDLFEQNQVEAASMPLTVHLEGVPAFPNEQTASAPSTPVAASPILLVTKPGDAMPLVSAAAHRLPAVPPPRSAAP
LVPSDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNVGNRGQRVPDWHLDPLKHELIQSVLKLT
RGADPWQIYHALLQPRSMLRGRSALEGVTASNLDKLVMAVSTAVKESEWSPQQARLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAN62094.1 putative integrase Not tested PAGI-2(C) Protein 7e-173 63
unnamed AFG30104.1 Int Not tested PAGI-2 Protein 2e-163 61