|
Name : Ajs_1844 (Ajs_1844) Accession : YP_986106.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1926335 - 1927159 bp Length : 825 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: pen:PSEEN3944 transposase, IS3 family (orf 2) DNA sequence : ATGTGCAAGGTGATGCAAGTCCACCCCAGTGGCTACTACGCATGGAAGGCAGCGCCGCAGAGTCCACGGGCTAAGGACGA CCAGAGGTTGCTGGGCTTGCTCAAGCAGGCATGGCTGGAGAGCGGCGGTGTCTATGGCTACCGCAAGCTCACGCTGGACA TGCGCGACCTGGGCGAGCGCTGCGGCAAGCATCGCGTTGCGCGGTTGCTCAAGCTCGAAGGCCTGCGCTCGCAGACGGGC TACGGCCGCAGGCCTGGGCGGCGAGGCGGCAAGCCTGCAGTGGTCGCACCAAACCACCTGCAGCGCCAGTTCAAGGTGGA TGAGCCCAATCAGTCCTGGGTCACCGACATCACCTACATCCGAACCCACGAAGGCTGGCTGTACCTGGCGGTTGTGGTCG ATCTGTTCTCGCGCCAAGTAGTGGGCTGGTCCATGGGCAGCCGCATTGACACGAGCCTGGTCCTCGATGCACTGCTGATG GCGCTATGGCGCCGCCAGCCGCATGCGCCTGTCATGGTTCATTCCGATCAGGGCTGTCAGTTCACCGGCCACGAGTGGCA GACCTTCCTGCGCGAGCACAACCTGGTCAGTAGCATGAGCCGGCGTGGCAACTGCCACGACAACGCCGTGGCCGAGAGCT TCTTCCAACTGCTCAAGCGCGAACGCATCCGCAGGCGGGTCTACGAAACCCGTGACGATGCGCGAGCGGACGTCTTCAAC TACATTGAAATGTTCTACAACTCACAGCGCCGTCATTCATCGGCGGCGGGACTATCACCTGTAGAGTTCGAACAGCGACA TTCCCAACGGCTCAAAAGTGTCTAG Protein sequence : MCKVMQVHPSGYYAWKAAPQSPRAKDDQRLLGLLKQAWLESGGVYGYRKLTLDMRDLGERCGKHRVARLLKLEGLRSQTG YGRRPGRRGGKPAVVAPNHLQRQFKVDEPNQSWVTDITYIRTHEGWLYLAVVVDLFSRQVVGWSMGSRIDTSLVLDALLM ALWRRQPHAPVMVHSDQGCQFTGHEWQTFLREHNLVSSMSRRGNCHDNAVAESFFQLLKRERIRRRVYETRDDARADVFN YIEMFYNSQRRHSSAAGLSPVEFEQRHSQRLKSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 6e-37 | 46 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 6e-37 | 45 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 5e-40 | 44 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 2e-40 | 44 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 1e-40 | 44 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-28 | 43 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 2e-28 | 43 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 2e-42 | 43 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 2e-28 | 43 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 2e-28 | 43 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 1e-28 | 42 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 1e-28 | 42 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-39 | 41 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-39 | 41 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-39 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ajs_1844 | YP_986106.1 | integrase catalytic subunit | VFG1631 | Protein | 1e-42 | 43 |
| Ajs_1844 | YP_986106.1 | integrase catalytic subunit | VFG0785 | Protein | 1e-28 | 43 |
