Gene Information

Name : Ajs_1813 (Ajs_1813)
Accession : YP_986076.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 1883620 - 1885257 bp
Length : 1638 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_2423 ABC transporter related

DNA sequence :
ATGCGCGCTGCGCCCCCCCTGTCTCCCTCGTCCGCGCCGCTGCTGCAGGTGCGGGACCTGCGGGTGCGCTTCGGCGCCAA
GCAGGTGGTGCATGGCGTGAGCTTCGACATGGCCCCGGGCGAAAAGCTCGCGCTGGTGGGTGAATCCGGCTCGGGCAAAA
CAGTGACCGCGCTGGCGCTGCTGCGCCTGACGGGCGATGCGCAATTGGAGGGGAGCGCGCTGATGCACGGGCGTGATCTG
CTCCAACTGCCTGAGCGCGAACTGCGCGGCGTGCGCGGCGGCGATATCGCCATGGTGTTCCAGGAGCCCATGACGGCGCT
GAACCCGCTGATGACGATTGGCGACCAGGTGGCCGAGGTCTTGGTGCTAAAACAGGCCCTGAGCAAGGCGCAGAGCGCGC
AAGCAGCTATCGAACTGCTAGCGAGTACCGGCATCCCCGAGCCGGCGCGGCGCGCGGGCAGTTTTCCGCACCAGCTTTCG
GGAGGGCAGCGCCAGCGCGCCATGATCGCCATGGCCCTGGCCAGCCGACCGAAGCTGCTGTTGGCCGACGAGCCCACCAC
CGCGCTGGACGTGACGCTGCGCGGCCAGATCCTGGACCTGCTGTCCGACCTGCAGCGCCAGACGGGCATGGCCGTGCTGC
TCATCACGCACGACCTGCTGCTGGTGCGCCGCTTTGCCGATCGCGTGGCCGTCATGGAGCAGGGCGCCGTGGTGGAGCAG
GGTACCGTCGCCCAGGTGTTCGACGCACCGCAGCATGCCTACACGCGCAAGCTGATCGGCAGTACGCCGCGGCGGGACGT
AGTAGAAAGCGGTGCCGACGGCGACGCCGTGCCCGCCGCGCAGGCAAGCGGCCTGCGCGTGGCCTACCCCGTGCCGGTGC
CGGGCATCCGCGGCTGGTTTGCCAAGGGCGAATTCGTGGCGGTGAAGGACGCGGGCTTTCGCATTGCGCAGGCGCGCACG
CTGGGGGTCGTCGGCGAATCGGGCTCGGGCAAGTCCACGCTGGCCCAGGCGCTGCTGGGCCTGCTGCCGTCGCGCGGCGA
GCTGCGGGTTGCCGGCCAGGCCTGGCAGCAGCCCGCCCACCGCAACACCGTGCACAACCAGCAGCTGCGCCGGAAGGTGC
AGGTGGTGTTCCAGGACCCGTTCTCGTCCCTGTCGCCGCGCATGACCGTGGAGGAGATCGTGGGCGAGGGCCTGCGCGTG
CACATGCCTGCGCTGGACGTGGCCGAGCGCCGCGCGCGCGTGGCCGCCATGTTGGCCGAGGTGGGCCTGACGGACGCGCA
ATTCCCCGGCCTGCTGGCGCGCTACCCGCATGAGTTCTCGGGCGGCCAGCGCCAGCGCCTGGCCATTGCGCGCGCGCTCA
TCGTCGAACCGCAGGTGCTGGTGCTGGACGAGCCCACCAGCGCGCTGGACGTCACCATCCAGCAGCAGGTGCTGAGCCTG
CTGCAGCGCCTGCAGAAGGAGCGGGCGCTGTCGTACCTGCTCATCACGCACGACGTGGCGGTGGTGCGCGCCATGGCGCA
TGAGGTCATTGTCATGAAGGACGGCGAGGTGGTGGAAAGCGGCAGCGTGCACCAGGTGCTGGATGCGCCGCGCCACGCCT
ACACGCAACGGCTGGTGCAGGCCGCGCAGCCGGTCTGA

Protein sequence :
MRAAPPLSPSSAPLLQVRDLRVRFGAKQVVHGVSFDMAPGEKLALVGESGSGKTVTALALLRLTGDAQLEGSALMHGRDL
LQLPERELRGVRGGDIAMVFQEPMTALNPLMTIGDQVAEVLVLKQALSKAQSAQAAIELLASTGIPEPARRAGSFPHQLS
GGQRQRAMIAMALASRPKLLLADEPTTALDVTLRGQILDLLSDLQRQTGMAVLLITHDLLLVRRFADRVAVMEQGAVVEQ
GTVAQVFDAPQHAYTRKLIGSTPRRDVVESGADGDAVPAAQASGLRVAYPVPVPGIRGWFAKGEFVAVKDAGFRIAQART
LGVVGESGSGKSTLAQALLGLLPSRGELRVAGQAWQQPAHRNTVHNQQLRRKVQVVFQDPFSSLSPRMTVEEIVGEGLRV
HMPALDVAERRARVAAMLAEVGLTDAQFPGLLARYPHEFSGGQRQRLAIARALIVEPQVLVLDEPTSALDVTIQQQVLSL
LQRLQKERALSYLLITHDVAVVRAMAHEVIVMKDGEVVESGSVHQVLDAPRHAYTQRLVQAAQPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-75 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-75 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-75 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-75 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-84 41