|
Name : Ajs_1753 (Ajs_1753) Accession : YP_986017.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : transposase, IS4 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 1818155 - 1819138 bp Length : 984 bp Strand : - Note : PFAM: transposase, IS4 family protein; KEGG: rso:RSc1704 ISRSO18-transposase protein DNA sequence : ATGAAGCAAAGCAGCCTGGGCCTGAGCAACACCACCAAGCGGACACGCAAGCGCGAATTCCTTGATGCGATGGAACTGGT GGTGCCCTGGGCGGAACTGGTGTCGCTGATAGAGCCCTACGCTCCCGAGAGCGGGCGCCGGGGTCAGCAGCCGTTTGCGG TGCAGACGATGCTGCGCATCCACTTCATGCAGCAGTGGTTCAAACTCAGTGACCCCGCCATGGAAGAAGCCTTGCACGAC GTGCCAGCCTTTCGGGACTTTGCAGGCCTGTCCCACTGGGACGCACAGATCCCCAGTGAATCGAGCATCCTGCGCTTTCG TCACCTGCTGGAGCGCCACAAGTTGGCCGATCAGATCCTGGCCACGGTCAATGCACTGCTGCAGGCCAAGGGACTGCAAC TGAAGGCCGGCACCGTGGTAGATGCCACGCTGATTGCCGCGCCCAGTTCCACCAAGAACCAAAGCGGCGAGCGCGACCCC GAGATGCACCAAAGCAAGAAGGGCAACCAGTGGTACTTCGGCATGAAGGCGCACATCGGGGTGGATGCGGACTCGGGCCT GGTACACACGGTGCGGGGCACCAGCGGCAACGTGAGCGATGTGGTTGAAGCCAACAGCCTGCTGCACGGGCAGGAGACAG ACGCCTTCGGCGATGCGGGCTATCAGGGAGTAGACAAACGCAGCGACGCCAAGAAGGAGGTGCGCTGGCATGTGGCCATG AAACGAAGCGTGCGCCAGGCGCTGGACAAGGACAAGCCCGTAGATGCGTTGATCGAGCAGCACGAGAAGATAAAGGCGAG CATCCGGGCCAAGGTGGAACACCCGTTTCGAATAATCAAGCAGCAGTTCGGGTATGTGAAGGTGCGCTACCGCGGCCTGA AGAAGAACACTGCGCAGATCGTCACGCTGTTTGCGCTGAGCAACCTGTGGATGGTCAGGCACAAGTTGCAGGCCCTGGGA CAGGTGCGCGTGCAAGGGGCGTAA Protein sequence : MKQSSLGLSNTTKRTRKREFLDAMELVVPWAELVSLIEPYAPESGRRGQQPFAVQTMLRIHFMQQWFKLSDPAMEEALHD VPAFRDFAGLSHWDAQIPSESSILRFRHLLERHKLADQILATVNALLQAKGLQLKAGTVVDATLIAAPSSTKNQSGERDP EMHQSKKGNQWYFGMKAHIGVDADSGLVHTVRGTSGNVSDVVEANSLLHGQETDAFGDAGYQGVDKRSDAKKEVRWHVAM KRSVRQALDKDKPVDALIEQHEKIKASIRAKVEHPFRIIKQQFGYVKVRYRGLKKNTAQIVTLFALSNLWMVRHKLQALG QVRVQGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 5e-80 | 56 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 3e-67 | 56 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 2e-67 | 56 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 1e-52 | 52 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-65 | 49 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-65 | 49 |
