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Name : Ajs_1417 (Ajs_1417) Accession : YP_985708.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : helicase domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 1483155 - 1485434 bp Length : 2280 bp Strand : - Note : PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: xcv:XCV2386 putative helicase DNA sequence : ATGTCCCTCGATCTCGAAACCACCGCCGCTGAAGCCACGCCCGTACAGGGCGAACTGCTCGATGCGGAATCTTCCCCTCT GACCCTGAGCCTTCAGGATTTCGTCGGCGAATTCGGCGACGAACTGCTCGACGCCCTCAACAGCGCAAACCCGCCGGTCT ATAACGGCCAGCCACAGACGCGCCGGCAACTCATCGTCGCCGGCCTCAAGCGCAAGCTGTTCCCGGCCCAGGCCGAAGTT GTCCACGCCGCTGCCGAATTGCTGATCGACCGTGGCGAACGCGCTGCGATCGTCAACGGCGAGATGGGCTGCGGCAAGAC GACCGTCGGCATCGCCACGGCCGCGGTGCTCAACGCCGAAGGCTACCGCCGCACCCTAGTTCTCTCGCCACCGCACCTTG TTTACAAGTGGCGGCGTGAGATCCAGGAAACCGTAGCAGGTGCCAAGGTCTGGGTGCTCAACGGACCGGATACGCTGGTC AAACTCATCAAGCTGCGCGAGCAGTTGGGTGTACACCCCACGGGCCAGGAGTTCTTCATCCTGGGGCGCGTGCGGATGCG GATGGGGTTCCACTGGAAGCCCGTCTTCACCCAGCGGCGTACCCGCCACGGCCACGTGGCTGCGTGCCCGGACTGCGGCA CGGTCATCACCGACCTCGATGGCGAGCCGGTCAATCCGGTCGCGCTCCAAGCCGAGGAATACCGCAGGAAGTGCAGCCAT TGCGCCGCGCCCCTGTGGACGCTGATCCGCCCGCGCAGCCTGTCCGGCAGCGACCAGTCCTCGGCCGTGCTGAAAGCCTT GAAGCGCATCCCGACGATCGGGGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCGGCGACGGGTTCCTGGCGTCGATGC TGGGCGACAACATCCACGAGTTCATCAACTTGATGGATGGCAACGGCGAACTGGTCTTCTCTGACCGCCAGGCGCATCGC ATGGAAAGAGCGATGGCCAACATGGAGTTCGGCTTCGGCGAAGGCGGCTACCAGCCGTCCGAGTTCATCAAGCGCTACCT GCCACAGGGCACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACGGTGGCAGCGCCCAAGGCCAGGCCA TGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGTTGATGGGCGGCTACGGCGACGACCTGTTC CACCTGCTGTTCCGGGCACTGCCTGGACGGATGATCGAAGACGGCTACCGCCCGAGCACGAGTGGGAGCATGACTTCGGC CGCGATGGCGTTCATGCGCGATCACGGCGTCCTGAAGGACATCTACTCCGAGAGCGCCGGCACGGCGCACAAGACGGCCA AGGGCACCAAGGTATCGGTGCGCACGGTCAAGGCTCCCGGCTTCGGGCCGAAAGGGGTCTTGCGGTGCATCCTGCCGTTC ACGATTTTCCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCGCCGTATGACGAGGAGTTCCGTGAAGTCGCAATGGA CACGGCGCAAGCCGCGGCCTACCGCGACCTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA CGACGCTGCTGGGCGTGGTGCTCAACGTGCTGCTTGCCTGGCCGGACTGTTGCTTCCGGTCGGAAACCGTGGTGCATCCG CGCACGCGCAACACCTTGGCGTTCGTCCCGGCTCAGTTCAACGAGTTCGAGGTGACGCCGAAAGAGCGCGAGCTGATCGA CATCTGCAAGGAAGAGAAGGCGCAGGGCCGCAAGGTCTTGGCGTACACGGTCTATACCGGCACGCGCGACACCACATCGC GCTTGAAGGTGCTGCTGGAACAAGAAGGTTTTCGGGTGGCGGTGCTGCGCGCAAGCGTGGACGCCAGCCGCCGCGAGGAC TGGATCGCCGAGCAACTGGACCGTGGCATCGACGTGCTCATCACCAACCCCGAGCTGGTCAAGACGGGCTTAGACCTGTT GGACTTCCCGACGATCGTTTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAGGCGGCACGCCGCTCCTGGCGCA TCGGACAGAAACAGCCGGTGCGCGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAGCTGATGGCC AAGAAGATCATGGTCTCGCAGTCCACCTCGGGCGACGTACCCGAATCGGGCCTGGATGTGCTCAACCAGGACGGTGATTC CGTCGAGGTCGCATTGGCCCGGCAACTGGTCGCCGCCTGA Protein sequence : MSLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQTRRQLIVAGLKRKLFPAQAEV VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV KLIKLREQLGVHPTGQEFFILGRVRMRMGFHWKPVFTQRRTRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQAHR MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF HLLFRALPGRMIEDGYRPSTSGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP RTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRRED WIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 98 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 88 |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 71 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 71 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 71 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 7e-175 | 50 |
