Gene Information

Name : Ajs_1401 (Ajs_1401)
Accession : YP_985692.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1469431 - 1470339 bp
Length : 909 bp
Strand : -
Note : KEGG: rme:Rmet_2350 putative secreted protein

DNA sequence :
ATGAAGCACCCTGTACTCGCGCTGCTGGGACTGCTGGCCGTGGCCGCGGCACCCGTCGCCCATGCAGTGGAAATCCTGCG
CTGGGAGCGCATGCCGCTGGCAGTGCCGCTGAAGGTCGGTCAGGAACGCATCGTGTTCATCGACCGGGACGTGCGCGTGG
GCGTGCCCGCGGGCGTGGGCGAGCGCCTCCGCGTACAGAGCGCGGGCGGCGCGGTGTACCTGCGCGCCAGCGAGCCGATC
GAGCCCACGCGGTTGCAACTGCAGGACGCCGACACGGGCGCGCTGATCCTGCTGGACATCGCGGCCGAACCACCCAAGGA
CGGCGAGGCCGAGCTGGAGCCGGTGCGCATCGTCGAGGGCAGCAGCACTCCAGCGCGCTACGGCGATCAGGCAGGCGGCG
CCGACGATGCCCCAGCACGTGCCCAGGCAGGTGCTCGGACCGCGCGGCGCGAAACCCCGGTCCCTGTCGTCCTGACGCGC
TTCGCCGCGCAGAACCTCTACGCGCCGTTGCGCACCGTGGAGCCGCTGCCGGGCGTCATGCGGGTCAACCTGCCCCGCGA
CCTCGACCTGGACACACTGATGCCAACGCTGCCCGTGCGCGCGGTCGCGCTCGCGTCGTGGCGCCTGGAGGACCAGTGGG
TCACAGCCGTGCGCCTGACCAACGGCAGCGGCGGCTGGATCACGCTCGACCCGCGCGTGCTGCAAGGCGATTTCCTCACC
GCCACCTTCCAGCACGAGGCGCTGGGCCCGCGCGGCACGCCCGAGGACACGACCGTCCTGTACCTGGTCACGCGCGGCCG
CGGCCTCGCGCAGTCGCTGCTGCCGGCGATTCACCGCTTCGACCCTGCCCTGCATCTGCCGCAGCCGGACGGCGACGAGA
ACACCAAGGAGGCCCGCCATGCGCAGTAA

Protein sequence :
MKHPVLALLGLLAVAAAPVAHAVEILRWERMPLAVPLKVGQERIVFIDRDVRVGVPAGVGERLRVQSAGGAVYLRASEPI
EPTRLQLQDADTGALILLDIAAEPPKDGEAELEPVRIVEGSSTPARYGDQAGGADDAPARAQAGARTARRETPVPVVLTR
FAAQNLYAPLRTVEPLPGVMRVNLPRDLDLDTLMPTLPVRAVALASWRLEDQWVTAVRLTNGSGGWITLDPRVLQGDFLT
ATFQHEALGPRGTPEDTTVLYLVTRGRGLAQSLLPAIHRFDPALHLPQPDGDENTKEARHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-99 91
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-70 65
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-57 57
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-57 57
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 2e-60 57
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 4e-57 56
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 1e-45 49
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 2e-45 49
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 9e-45 49
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 9e-45 49
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 6e-45 48
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 1e-46 48
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-42 45